Rv3244c - c.-852A>C
Drug resistance types
16 Sensitive
20 RR-TB
88 HR-TB
45 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
76 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 2 |
| lineage4.9 | 109 |
| lineage2.2.1 | 14 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La3;lineage4.9 | 13 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 2 |
| 4 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.8 | 3 |
| La1;lineage4.9 | 3 |
| lineage2.2 | 5 |
| lineage4.1.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.3.4 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage3 | 4 |
| La2;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage6.1.1 | 2 |
| lineage4.3.4.1 | 4 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage1.1.3.1 | 1 |
| La1.6;lineage4 | 1 |
| La1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 251 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR5341456 | Other | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR1063896 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR4797474 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR2446566 | Other | lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1723537 | HR-TB | lineage2.2.1 | cn | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR212001 | HR-TB | None | SRR28351554 | Other | La1.6;lineage4 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4798504 | RR-TB | lineage3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6832787 | Other | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045548 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | SRR20969380 | HR-TB | lineage4.4.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR10808730 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341425 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR212033 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14782054 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4796254 | Other | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None |
|---|
