Rv0701 - c.-212A>G
Drug resistance types
8 Sensitive
10 RR-TB
54 HR-TB
28 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 64 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.2.1 | 9 |
| lineage4.3.2.1 | 1 |
| La3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage3 | 2 |
| lineage2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 1 | |
| La1.6;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.8.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage4 | 3 |
| lineage4.3.4.2.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| M.canetti;lineage4.2 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1.2 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.9;lineage7 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341384 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR1063896 | HR-TB | None | SRR28351554 | Other | La1.6;lineage4 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6832787 | Other | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None |
|---|
