Rv2477c - c.504G>C


Drug resistance types
5 Sensitive 3 RR-TB 48 HR-TB 16 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 90 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 12
lineage2.2.1.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 3
lineage4.9 39
lineage4.9;lineage6.3 3
La3;lineage4.9 3
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
lineage4.6.3;lineage4.9 1
lineage4.1.2.1 11
La1.7.1;lineage4.9 1
lineage2.2.1 5
lineage4.3.4.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1 2
La3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.3.4.2.1 1
lineage4.4.2 1
11
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 2
lineage3 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
lineage4.8 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 9
M.canetti;lineage2.2.2;lineage6.2 2
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage5.2 2
lineage4.1.1.1 2
lineage4.1;lineage4.8 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.3.3 1
La3;lineage2 1
lineage4.4.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage6.2.3 1
lineage6.3.1 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4 1
lineage4.1.3 2
lineage3.1 1
La1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.2 1
lineage4.6.2.2 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 168
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6045548 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1180444 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR1172817 Other La3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
ERR9786671 Other None
ERR9786604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR6358979 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 HR-TB lineage3 None
ERR736817 HR-TB lineage4.3.4 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4799025 Other lineage4.8 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR176793 Other lineage4.1.1.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR6359082 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR9786642 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR9787061 Sensitive lineage6.2.3 None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR181824 MDR-TB lineage4.9 None
ERR9786843 Other None
ERR4407463 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675524 Other lineage4.9;lineage6.3 None