lineage | Count |
---|---|
9 | |
lineage2.2.1.2 | 2 |
lineage4;lineage2 | 1 |
lineage2.2 | 4 |
lineage4.9 | 7 |
lineage2.2.1 | 2 |
lineage4 | 10 |
lineage4.8 | 3 |
lineage1.1.1 | 1 |
lineage3 | 2 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6044780 | Other | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283021 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None |
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