EBG00000313339 - n.3069A>G


Drug resistance types
69 Sensitive 5 RR-TB 206 HR-TB 32 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 156 Other
lineage Counts
lineage Count
219
lineage4.2.1.1 1
lineage3.1 4
lineage4 69
La2 1
lineage2.2.1 31
lineage4.7 1
lineage4.1.2 2
lineage4.8 2
lineage4.1.2.1 14
lineage4.3.2.1 1
lineage4.4.1.2 1
lineage4.1.1.3 4
lineage4.9 26
lineage4.6.2 1
La1.8.1 7
lineage4.1.3 2
lineage4.6.2.2 5
lineage4;lineage3.1 1
La1.2 2
lineage2 3
lineage1.1.2 3
La1 1
lineage3.1.2 1
lineage2.2.1.2 3
lineage2.2 9
lineage4.3.3 8
lineage3 5
lineage4.6.1.1 1
lineage4.3.4 1
lineage4.3.2 3
lineage4.6.1.2 1
lineage1.1.3.1 1
lineage4.3.4.2.1 4
lineage4.6.4 2
lineage5.2 4
lineage2.2.1.1 5
lineage6 1
lineage6.3.1 1
lineage6.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.2 2
La3 1
lineage4.4.1.1 3
lineage1.2.1.2 1
lineage4.5 3
lineage4.3.4.1 3
lineage1.2.1.2.1 1
lineage4.2.1 1
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
lineage4.1.1.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4;lineage3;lineage2.2.1 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage4.1 1
lineage4.1.1 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage2.1 1
lineage4.3 1
lineage4.3.4.2 1
lineage3.1.3 1
lineage4.1.1.2 1
lineage4.2.2.2 1
lineage4.9;lineage2.1 1
spoligotype Counts
spoligotype Count
None 487
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR294248 HR-TB None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6789626 Other None
ERR294266 HR-TB None
ERR323036 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR502532 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR502908 HR-TB lineage2.2.1 None
ERR5311099 HR-TB None
ERR323107 Other lineage4 None
ERR5311090 HR-TB None
SRR7496509 Other None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR5311081 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496517 Other None
ERR323038 HR-TB None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323041 HR-TB None
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323045 HR-TB None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323053 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11465025 Other lineage4.1.1.3 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR11489020 MDR-TB lineage2.2.1 None
ERR1035122 Sensitive None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1034652 Other None
ERR1063859 HR-TB None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR1063858 HR-TB None
ERR1063862 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4 None
ERR1213918 MDR-TB lineage4.6.2 None
ERR3283024 Other None
ERR133986 HR-TB None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283021 HR-TB None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283036 HR-TB None
ERR3283040 HR-TB None
ERR3283047 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3439432 Other None
ERR3445504 HR-TB None
ERR3797015 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3468474 Other La1.8.1 None
ERR3797016 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797014 Other None
ERR3797081 Sensitive lineage4 None
ERR3797017 Other None
ERR3797047 HR-TB lineage4 None
ERR3797044 Other None
ERR3797069 Other None
ERR3797073 HR-TB La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797082 Other lineage4.9 None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797083 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797087 Sensitive lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR4024991 Other None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR405209 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4188247 HR-TB None
ERR4769452 HR-TB None
ERR473332 Other lineage4 None
ERR4407463 HR-TB None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4797474 Other None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4799025 Pre-XDR-TB None
ERR4798406 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR5908228 Other lineage4.3.3 None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR5336148 Other None
ERR4810741 HR-TB None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR6198317 Other La1.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358979 Other None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736835 HR-TB None
ERR736848 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR736856 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736874 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR751326 Sensitive lineage4 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR21733183 RR-TB lineage1.1.2 None
ERR8976043 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117709 HR-TB None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9117805 Other lineage4.3.2 None
ERR9119096 Other lineage4.3.3 None
ERR9119499 MDR-TB lineage5.2 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786843 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787165 Other lineage6 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR10315567 Other lineage2.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
ERR987722 HR-TB None
ERR990545 Other lineage3 None
SRR10809074 Sensitive lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR1165506 Other lineage4.1.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169306 Other None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1172310 HR-TB None
SRR1172234 Other None
SRR1172857 MDR-TB None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173166 Other lineage4.9 None
SRR1172951 Other None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173562 HR-TB lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173484 Other lineage4 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173633 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173629 Other None
SRR1173777 Other lineage4 None
SRR1173788 Other None
SRR1173778 Other None
SRR1175049 RR-TB None
SRR1174897 HR-TB None
SRR1175074 MDR-TB None
SRR1180270 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180172 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1196677 HR-TB lineage2 None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13423649 Sensitive lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14782405 HR-TB None
SRR13861575 Other lineage4.9 None
SRR14801749 Sensitive None
SRR1510066 Other lineage1.2.1.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1791696 Other La1.8.1 None
SRR15368973 Other None
SRR15723219 Sensitive lineage4.5 None
SRR1640750 HR-TB None
SRR1791747 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19304036 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR20969677 HR-TB lineage2 None
SRR20969731 Other lineage2.2.1 None
SRR8692868 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR8692822 Other lineage4.9 None
SRR8692887 Other None
SRR8692905 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR21732980 Other lineage4.3.3 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR25827605 Pre-XDR-TB lineage4;lineage3;lineage2.2.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR25534536 Sensitive lineage2.2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR176778 HR-TB None
ERR176779 HR-TB None
SRR6325445 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR1035239 HR-TB None
SRR3675465 HR-TB None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR4814352 HR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675482 HR-TB None
ERR158583 HR-TB None
SAMN02585910 Other lineage2.2.1 None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675488 HR-TB None
SRR3675221 HR-TB None
SRR3675486 HR-TB None
SRR3675222 Other None
ERR4814734 Other lineage1.2.1.1 None
SRR3675234 Other None
ERR702405 Sensitive lineage2.1 None
SRR3675270 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
ERR4814829 Sensitive lineage2.2.1 None
ERR176568 Other lineage4.3 None
ERR176751 HR-TB None
ERR176643 HR-TB None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR181887 HR-TB None
ERR4815752 Other lineage4.9 None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675502 Other None
ERR212001 HR-TB None
ERR2027263 Other lineage4 None
SRR3675558 HR-TB None
SRR3675550 Other None
ERR212033 HR-TB None
SRR3675571 HR-TB None
SRR3675574 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR4816585 Other lineage2.2 None
SRR5341384 Sensitive lineage4.9 None
SRR3742665 HR-TB None
ERR4816656 HR-TB None
ERR4818110 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818021 Other La1.8.1 None
SRR7496472 Other None
ERR2513121 Sensitive lineage3.1.3 None
ERR1035162 Other None
ERR4818285 HR-TB lineage4.1.2.1 None
ERR234659 HR-TB None
ERR3275196 Other lineage2.2.1 nl
ERR4818252 Other lineage4.1.1.2 None
ERR4818274 Other lineage4 None
ERR2229143 Other lineage4.1.1 None
ERR4818929 HR-TB None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4819051 Other lineage4 None
SRR5341453 Sensitive None
ERR2513470 Other lineage4.2.2.2 None
ERR4818615 Other None
SRR5341387 Other lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341373 HR-TB lineage4 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
SRR5341418 Other None
SRR5341425 Other lineage4 None
SRR5341456 Other None
SRR5341437 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
ERR2514692 Other None
SRR5341302 HR-TB None
SRR5341313 HR-TB None
ERR1023509 Other None
SRR5341315 Sensitive None
SRR5341333 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693231 Other None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
ERR2446563 Other lineage2.2.1 nl
SRR5341469 Other lineage4 None
SRR5341470 HR-TB None
ERR2693239 HR-TB None
ERR4821053 Other lineage3 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5535933 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR6045526 HR-TB None
ERR278594 HR-TB None
SRR6045503 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045519 HR-TB None
SRR6045555 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6046133 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044790 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6044925 Sensitive lineage4.9 None
SRR6045952 HR-TB None
SRR6045010 Other lineage4 None
SRR6045327 HR-TB None
SRR6045053 Other None
SRR6045158 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045233 HR-TB None
SRR6046066 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
SRR6046362 HR-TB None
SRR6046397 Other None
ERR1213875 Sensitive lineage4.3.3 de
ERR1213899 Other lineage4.1.1.3 pe
ERR1213930 Other lineage4.3.2 pe
SRR6046514 HR-TB None
SRR6325444 HR-TB None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6046492 Other None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 HR-TB None
ERR4831117 HR-TB None
ERR4872093 MDR-TB lineage5.2 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6896155 Sensitive lineage3 None