Rv0639 - c.657C>G


Drug resistance types
28 Sensitive 6 RR-TB 110 HR-TB 41 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 93 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.9 23
M.canetti;lineage2.1;lineage3 1
lineage4.9 68
lineage4.3.4.2.1 5
14
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9;lineage7 3
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.7;lineage4.9;lineage7 2
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4 1
M.canetti;lineage4.9 3
lineage2.2.1 12
La3;M.canetti;lineage2.1;lineage4.9 11
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 3
La1.7;lineage3.1;lineage4 1
lineage4.3.4.1 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9 3
lineage4.8 1
M.canetti;lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9 9
La3;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage4.1.1.1 2
lineage1;lineage4.9 1
lineage4.4.1.2 1
lineage4.5 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1.2.1 1
lineage2.1 2
La3 2
lineage2.2.1.2 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;lineage4.9 1
lineage3 1
lineage1.1 1
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage4.1.2.1 1
lineage4.1.1;lineage4.9 1
lineage3.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1.1 2
spoligotype Counts
spoligotype Count
None 281
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR6358991 HR-TB None
ERR161037 Other lineage4.9 None
ERR4811142 RR-TB None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4811311 Other None
ERR926161 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4817893 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR212001 HR-TB None
SRR6044815 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1173363 Other None
SRR6046878 Other lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR5341330 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926158 Sensitive lineage4.9 None
ERR4810741 HR-TB None
ERR4769450 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR752229 Other lineage4.5 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR987729 HR-TB lineage3.1.2.1 None
SRR12708372 Sensitive lineage4.9 None
ERR4816585 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2.1 None
SRR20969708 HR-TB lineage2.2.1 None
SRR1172728 RR-TB La3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR387051 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1196494 MDR-TB None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR29097004 Other lineage3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR161034 Other lineage4.3.4.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR2446566 Other lineage4.9 None
ERR3077978 Other lineage1.1 None
ERR212123 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4811105 HR-TB None
ERR4810624 HR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811075 Other None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR12416824 HR-TB None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR4812155 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
ERR212125 HR-TB lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
SRR12708416 Sensitive None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None