lineage | Count |
---|---|
lineage4.9 | 34 |
M.canetti;lineage1 | 1 |
lineage4.3.2.1 | 1 |
La1.7;lineage4.9 | 2 |
lineage2.2.1 | 7 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage4.4.1.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.1.1 | 4 |
lineage3 | 1 |
La1.7;M.canetti;lineage4.9 | 1 |
lineage4.8 | 2 |
lineage1;lineage4.9 | 1 |
lineage4.2;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.5 | 2 |
M.canetti;lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4 | 1 |
La1.8.1 | 1 |
lineage2.2 | 3 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.4.2 | 1 |
lineage1.1.3.1 | 1 |
La1;lineage4.1.2 | 1 |
La1.7;lineage4.9;lineage7 | 1 |
La1;lineage4.9 | 1 |
lineage2.2.1.2 | 2 |
lineage4.1.2 | 1 |
lineage2;lineage4 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR6045347 | Other | lineage4.9 | None |
SRR15014655 | Other | M.canetti;lineage1 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
SRR29231479 | RR-TB | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR323037 | Other | lineage4.9 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
SRR14782405 | HR-TB | lineage4.9 | None |
SRR1180172 | Other | lineage2.2.1 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
ERR323056 | HR-TB | lineage4.4.1.2 | None |
ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
SRR5341456 | Other | lineage4.9 | None |
ERR4811493 | HR-TB | lineage4.9 | None |
SRR5341412 | Pre-XDR-TB | lineage3 | None |
ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
ERR9786639 | Sensitive | lineage4.8 | None |
ERR2693252 | Sensitive | lineage4.9 | None |
SRR6045217 | Sensitive | lineage4.9 | None |
ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR752229 | Other | lineage4.5 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
ERR400320 | Sensitive | lineage4.9 | None |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
SRR6045053 | Other | lineage4 | None |
SRR1791747 | Other | La1.8.1 | None |
SRR20969708 | HR-TB | lineage2.2 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
SRR6046046 | Other | lineage4.9 | None |
ERR323108 | HR-TB | La1.7;lineage4.9 | None |
ERR736856 | Sensitive | lineage4.9 | None |
SRR14782054 | Other | lineage4.9 | None |
ERR2446566 | Other | lineage4.9 | None |
SRR5341330 | Other | lineage4.9 | None |
SRR11662694 | Other | lineage4.9 | None |
SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
DRR188519 | Other | lineage4.4.2 | None |
SRR1181091 | Other | lineage2.2.1.1 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
ERR3797046 | HR-TB | lineage4.9 | None |
ERR1034634 | HR-TB | lineage4.9 | None |
ERR4769452 | Other | lineage4.9 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
SRR1184024 | RR-TB | lineage2.2.1.1 | None |
ERR779852 | Sensitive | lineage4.9 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
ERR6359082 | Other | lineage4.9 | None |
SRR11662690 | HR-TB | lineage4.9 | None |
SRR20970016 | Other | lineage2.2 | None |
ERR4769497 | Other | La1;lineage4.9 | None |
ERR4797313 | Sensitive | lineage2.2.1 | None |
ERR4811030 | Sensitive | lineage4.9 | None |
SRR1175127 | Other | lineage2.2.1.2 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
SRR20969731 | Other | lineage2.2.1 | None |
SRR6045548 | Sensitive | lineage4.9 | None |
ERR4769450 | Other | lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
ERR4812155 | Other | lineage4.9 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
ERR473332 | Other | lineage4.9 | None |
SRR1172796 | Sensitive | lineage2.2.1.2 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
ERR1023502 | MDR-TB | lineage2;lineage4 | None |
SRR1183144 | Other | lineage2.2.1 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
ERR3283055 | HR-TB | lineage4.9 | None |
ERR736872 | HR-TB | lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
SRR3675270 | Other | lineage4.9 | None |
SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
SRR5535933 | Other | lineage4.9 | None |
ERR4799025 | Other | lineage4.8 | None |
ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
ERR400345 | Other | lineage4.9 | None |