Rv3596c - c.678C>G
Drug resistance types
4 Sensitive
9 RR-TB
25 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 9 |
| lineage4.8 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 42 |
| lineage2.2.2 | 1 |
| lineage3 | 2 |
| La1.7.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| La1.7;lineage4.9 | 2 |
| 2 | |
| La1;lineage4.9 | 1 |
| lineage2.2 | 3 |
| lineage4.3.3 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045795 | Other | lineage2.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4821143 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786076 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR6336739 | HR-TB | lineage1.2.1.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045548 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR14782054 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4769452 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6045053 | Other | lineage4 | None | ERR4796577 | HR-TB | None |
|---|
