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SRA data
Rv3596c
- c.771G>T
Drug resistance types
5 Sensitive
0 RR-TB
2 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1.2
2
lineage4.9
2
lineage2.2
2
lineage3
2
lineage1.1.2
1
lineage2.2.1
1
lineage1.2.1.1
1
lineage1.1.3.1
1
lineage1.2.1.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR4797590
Sensitive
lineage3
in
ERR4814734
Other
lineage1.2.1.1
None
ERR8479578
Sensitive
lineage1.1.3.1
None
SRR1172796
Sensitive
lineage2.2.1.2
None
SRR1175127
Other
lineage2.2.1.2
None
SRR12006550
Sensitive
lineage1.2.1.2
None
SRR12199467
HR-TB
lineage1.1.2
None
SRR20969708
HR-TB
lineage2.2
None
SRR20969731
Other
lineage2.2.1
None
SRR20970016
Other
lineage2.2
None
Showing 1 to 10 of 13 entries
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