EBG00000313339 - n.2926G>A
Drug resistance types
86 Sensitive
25 RR-TB
141 HR-TB
79 MDR-TB
23 Pre-XDR-TB
3 XDR-TB
253 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 10 |
| La1.2 | 3 |
| lineage4.9 | 192 |
| lineage4.3.3 | 9 |
| lineage4.9;lineage6.3 | 9 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 20 |
| lineage1.1 | 1 |
| lineage4.1.2.1 | 25 |
| lineage3 | 13 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage2.2 | 5 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 4 |
| 22 | |
| lineage2.2.1 | 39 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.7;lineage4.9 | 2 |
| La1;lineage4.9 | 4 |
| lineage4.6.2.2 | 6 |
| M.canetti;lineage2.2 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1;lineage4.8 | 2 |
| lineage1.2.1.2 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage4.9 | 17 |
| lineage2.1 | 4 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage4.8 | 9 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 3 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.2.2 | 3 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2 | 4 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.2.1 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.6.4 | 2 |
| lineage4.9.1 | 1 |
| La3;lineage4.9 | 7 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.1.1 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.9 | 1 |
| lineage4 | 4 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.1.3 | 6 |
| La1.8.1 | 7 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 2 |
| La3;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.5 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 4 |
| lineage4.6.1.2 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.1 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.3 | 3 |
| lineage4.9;lineage7 | 2 |
| La1.7.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage6.1.3 | 2 |
| La3;lineage2 | 1 |
| lineage4.2.1 | 2 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;lineage1.1.2 | 1 |
| La3;lineage3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage6.1.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage6 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 610 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR23961549 | Other | La1.2 | None | SRR3675311 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | SRR3675221 | Other | lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR28044634 | Other | lineage3 | None | ERR212033 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR6044815 | Other | lineage4.9 | None | SRR26159048 | HR-TB | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1184372 | MDR-TB | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR1173633 | Other | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR18289200 | Other | lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR13285304 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR12015084 | Other | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1173562 | Sensitive | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR13861235 | HR-TB | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR069978 | HR-TB | lineage2.2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675482 | Other | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR245758 | Other | lineage4.9.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4769427 | Other | La1.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR26159063 | RR-TB | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212001 | HR-TB | None | ERR9787197 | Other | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173153 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1640750 | Other | None | SRR6046878 | Other | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3468607 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4769421 | Other | La1.2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR29772570 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR1063896 | Sensitive | None | SRR1175074 | Other | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172844 | Sensitive | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1173355 | Other | lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4821053 | RR-TB | lineage3 | None | SRR6045053 | Other | lineage4 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR3283021 | HR-TB | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR1184294 | Other | lineage4.9 | None | ERR4813861 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR867545 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR28868381 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR25827682 | Other | None | SRR1172857 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1791725 | Other | La1.8.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR9786604 | Other | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1173363 | Other | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR3283042 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173778 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR137286 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR18213713 | HR-TB | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971319 | MDR-TB | lineage4.1.2 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR8665994 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1169194 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR13292526 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR1023302 | MDR-TB | La3;lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR181887 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR3675248 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR6866639 | Other | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | Other | None | ERR4816656 | Other | lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1172234 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1173777 | Sensitive | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | SRR1165699 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4800341 | Other | lineage3 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR13423544 | Other | lineage4.5 | None | SRR5341453 | Other | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR7496509 | Other | None | SRR1172876 | MDR-TB | lineage4.4.1.1.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR29603691 | Sensitive | lineage3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4407452 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR2693238 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR7535086 | Other | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR11049020 | Other | lineage4.8 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28868489 | Other | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR6831950 | Sensitive | lineage4.3.3 | None | SRR29050859 | Other | lineage4.9 | None | ERR13285305 | Other | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None |
|---|
