lineage | Count |
---|---|
lineage4.9;lineage9 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9 | 39 |
lineage2.2.1.2 | 1 |
lineage4.3.4.1 | 2 |
La1.7;lineage4.9 | 3 |
lineage2.2 | 4 |
lineage2.2.1.2;lineage7 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage4 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.9;lineage7 | 3 |
lineage2.2.1 | 2 |
lineage2.1;lineage4.9 | 2 |
La1.2;La1.8.1 | 1 |
La1.7.1;lineage4.9 | 1 |
La3;lineage4.9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage4.8 | 1 |
La2;lineage4.9 | 1 |
La1;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.1.3 | 1 |
La2;lineage2.2 | 1 |
La3;lineage4.3.4 | 1 |
M.canetti;lineage1 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3797029 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR29097058 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR15014655 | Other | M.canetti;lineage1 | None |
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