Rv0668 - c.340C>T


Drug resistance types
71 Sensitive 19 RR-TB 111 HR-TB 21 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 84 Other
lineage Counts
lineage Count
lineage4.8 4
99
lineage3 12
lineage4 58
lineage4.9 44
lineage4.1.1.3 2
lineage4.3.4.2 2
lineage4.1.1 1
lineage2.2.1 17
lineage1.1.2 3
lineage4.1.1.2 1
lineage4.3 1
lineage4.3.4.2.1 7
lineage4.1.2.1 14
lineage4.6.2.2 2
lineage4.9;lineage2.1 1
lineage4.9;lineage4.2.1 1
lineage1.1 1
lineage2.1 2
lineage3.1 2
lineage2.2 8
lineage4.3.4.1 1
lineage2.2.1.1 1
lineage4.1 2
lineage4.3.3 4
La2 1
lineage4.7 1
lineage4.1.2 1
lineage4.3.2.1 1
lineage4.3.4.1;La1.7 1
La1.8.1 5
lineage6.1.1 2
lineage4;lineage3.1 1
lineage4.9;La1.3 1
La1.3 1
lineage3.1.2 1
lineage1.1.3.1 1
lineage4.5 2
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage6.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 1
lineage2.2.1.2 2
lineage1.2.1.2.1 1
lineage7;lineage2.2.1.2 1
La1.7.1 1
lineage4.9;lineage4.6.3 1
lineage4.3.4 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
spoligotype Counts
spoligotype Count
None 325
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4813263 MDR-TB lineage4.8 None
SRR3675545 HR-TB None
SRR3675383 HR-TB None
ERR4815556 RR-TB lineage3 None
ERR176740 HR-TB None
SRR3675510 Other None
ERR212034 HR-TB None
ERR4816151 Other lineage4.8 None
ERR212123 Other None
SRR3675558 HR-TB None
ERR4815815 Sensitive lineage4 None
ERR4817069 RR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4816417 Other lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816729 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2229143 Other lineage4.1.1 None
ERR3275196 Other lineage2.2.1 nl
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341387 Other lineage4 None
ERR3275941 RR-TB lineage4.3 nl
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818561 HR-TB lineage4 None
SRR5341453 Sensitive None
ERR4819546 HR-TB lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341456 Other None
ERR4819383 RR-TB lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341455 Sensitive lineage4 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4820030 Other lineage4.9 None
SRR5341308 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341319 Other lineage3 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341303 RR-TB lineage4 None
ERR4819863 RR-TB lineage4.9 None
SRR5341330 HR-TB None
ERR6359082 Other lineage4.9 None
SRR5341461 Sensitive lineage4 None
ERR4821053 Other lineage3 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341470 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
ERR2446563 Other lineage2.2.1 nl
SRR5341469 Other lineage4 None
ERR2693239 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR278594 HR-TB None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
SRR6045158 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045053 Other None
SRR6044876 Sensitive lineage4 None
SRR6045952 HR-TB None
SRR6045191 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6325444 HR-TB None
SRR6046210 Other lineage4 None
SRR6325442 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046492 Other None
ERR4829606 Sensitive lineage4.1.2.1 None
ERR4830353 Other None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR6511621 HR-TB None
ERR3077978 Other lineage1.1 None
ERR4831997 MDR-TB lineage2.1 None
ERR323034 HR-TB lineage3.1 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR502478 RR-TB lineage4.9 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831546 HR-TB lineage2.2 None
ERR11465801 Other lineage4.3.4.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR294248 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6831950 Other lineage4.3.3 None
ERR502510 Sensitive lineage4 None
ERR323036 HR-TB None
ERR5311090 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
ERR502524 HR-TB La2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323038 HR-TB None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR8217918 HR-TB None
SRR9970979 Sensitive lineage4.8 None
ERR323054 HR-TB lineage3.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
SRR9971168 Other lineage4.3.2.1 None
ERR323053 HR-TB None
ERR323085 Sensitive lineage4 None
ERR323066 Sensitive lineage4 None
ERR323063 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1034652 Other None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR133825 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283028 Other None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283017 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283047 HR-TB None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283031 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR3468544 HR-TB None
ERR3797015 HR-TB None
ERR3797016 HR-TB None
ERR3797048 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR3799304 Other lineage6.1.1 None
ERR4024991 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4188350 HR-TB None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4596902 HR-TB lineage3 None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4769554 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4799025 Pre-XDR-TB None
ERR4798099 Other None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4797474 Other None
ERR4799513 HR-TB lineage2.2 None
ERR4799378 Sensitive lineage4 None
ERR5908228 Other lineage4.3.3 None
ERR4811493 HR-TB None
ERR6358837 HR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6358979 Other None
ERR736834 Sensitive lineage4 None
ERR6866639 Other None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736865 HR-TB None
ERR751326 Sensitive lineage4 None
SRR26936983 MDR-TB lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR987722 HR-TB None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR8976043 HR-TB None
ERR9119096 Other lineage4.3.3 None
ERR9786444 Sensitive lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062928 RR-TB lineage4 None
SRR10808805 Sensitive None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR10993951 RR-TB La1.6 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140736 RR-TB None
SRR1165506 Other lineage4.1.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1173170 Other lineage4.9 None
SRR1172214 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1167055 Other lineage4.1.2.1 None
SRR1173281 RR-TB lineage3 None
SRR1173568 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1173587 Pre-XDR-TB lineage4.1.1.3 None
SRR1173740 Other None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173777 Other lineage4 None
SRR1174897 HR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR13861242 Other lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13861163 Sensitive lineage4.9 None
SRR1640750 HR-TB None
SRR13861241 HR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR1510066 Other lineage1.2.1.2.1 None
SRR13861305 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR14782405 HR-TB None
SRR1791696 Other La1.8.1 None
SRR1791747 Other La1.8.1 None
SRR1791826 Other La1.8.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR1792478 HR-TB La1.7.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR8692897 Other lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692825 Other lineage4.9 None
SRR8692887 Other None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR3675464 HR-TB lineage4.1 None
SRR6325445 HR-TB None
SRR3675482 HR-TB None
ERR1035239 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161033 HR-TB None
SRR3675488 HR-TB None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3675486 HR-TB None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3675501 HR-TB None
ERR181744 HR-TB None
SRR3675222 Other None
ERR4814734 Other lineage1.2.1.1 None
SRR3675246 Sensitive lineage4 None
ERR702405 Sensitive lineage2.1 None
SRR3675270 HR-TB None