Rv0639 - c.573A>C


Drug resistance types
28 Sensitive 11 RR-TB 50 HR-TB 30 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 91 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.2.1 1
lineage4.9 76
lineage2.2.1 10
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
lineage2.2 3
M.canetti;lineage4.2;lineage4.9 1
lineage4.9;lineage7 3
lineage2.1;lineage4.9 11
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.1 2
lineage3.1 1
lineage1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 2
M.canetti;lineage4.9 1
lineage2.2.1.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage2.1 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3 2
lineage4.1;lineage4.9 1
7
lineage3 1
lineage2.1;lineage4.9;lineage6.3 6
La1.7.X-unk4;lineage4.9 1
La3;lineage4.9 2
lineage4.3.4.2.1 2
lineage4.8 1
La2;lineage4.9 1
lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage4.9;lineage6.1.3 1
La1.7;M.canetti;lineage4.9 2
La1.7;lineage3.1;lineage4 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
lineage4.6.3;lineage4.9 1
lineage4.3.2.1 1
lineage2.2.1.2 1
La3;lineage2 1
lineage4.9;lineage9 1
lineage4.4.1.2 1
lineage2.2.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4 2
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
M.canetti;lineage4.6.4;lineage4.9 2
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.1.1 1
lineage4.1.1.1 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage4.2 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 213
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR6046046 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR926156 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786604 Other None
ERR4815604 Other None
SRR3675236 Other None
SRR1180406 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR926165 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR702406 Other lineage2.1 None
ERR926162 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811031 Other lineage4.5 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708392 Other lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1023509 MDR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR9786682 Other lineage4.1.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045053 Other lineage4 None
ERR234659 HR-TB None
SRR12708416 Sensitive None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR20969731 Other lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4769521 RR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR1180312 Sensitive lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1023236 Other lineage6.1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
SRR1184381 MDR-TB None
ERR4407463 HR-TB None
SRR1180300 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None