Rv0639 - c.573A>C


Drug resistance types
40 Sensitive 6 RR-TB 49 HR-TB 21 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
lineage4.9;lineage7 3
lineage4.9 78
lineage6.1.3 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage2.2 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 6
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
lineage2.2.1 12
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.1 1
La1.7;lineage4.9 3
lineage2.1 5
lineage4.3.4.2.1 2
8
lineage2.1;lineage4.9 11
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage4.9 3
lineage4.5 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1.1 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2.1 1
lineage2.1;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 1
lineage1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
La3 2
lineage2.2.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
lineage4.3.4.1 2
lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
La3;lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage2.2.1;lineage4 1
La3;lineage4.3.4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage3.1 1
lineage2.2.1;lineage4.9 1
lineage1.1.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2.1 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4 2
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
lineage4.1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;lineage2.2.1 1
lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 223
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR14066533 Sensitive lineage1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1196566 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR387051 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR20969677 HR-TB La3;lineage2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1710057 Other lineage2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046046 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR926162 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675446 RR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR212123 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29016901 Other La3;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR161037 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR1035122 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR176651 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4817893 Other La3;lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR20969731 Other lineage2.2.1 None
SRR1196494 MDR-TB None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR926161 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR971389 Sensitive lineage4.9 None
ERR702406 Other lineage2.1 None
ERR1063849 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1184294 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
SRR1183145 Other lineage2.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR3797070 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1184381 MDR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR926157 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SAMN02585910 Other lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675522 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4815604 Other None
ERR181887 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR926158 Sensitive lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR400326 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR5341323 Sensitive lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
SRR3675236 Other None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None