Rv3246c - c.561C>T
Drug resistance types
5 Sensitive
0 RR-TB
9 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage4.9 | 10 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.9 | 8 |
| La1.7;lineage4.9 | 1 |
| lineage2.2 | 2 |
| lineage2.2.1 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6398083 | Sensitive | lineage3 | ca | SRR5341330 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6045795 | Other | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046492 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6398085 | Sensitive | lineage3 | ca | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR11294534 | Other | La1.8.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
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