Rv3244c - c.210T>G
Drug resistance types
43 Sensitive
2 RR-TB
52 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 4 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 5 |
| lineage2.2 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.9 | 84 |
| lineage1.1.1 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 3 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 1 |
| 1 | |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.7 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 165 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29096527 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR4769452 | Other | lineage4.9 | None | SRR29096290 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR6359082 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR29096795 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR29096685 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR751326 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None |
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