Rv3596c - c.816G>C
Drug resistance types
72 Sensitive
8 RR-TB
34 HR-TB
15 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 91 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| 1 | |
| lineage2.2.1 | 16 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.8 | 3 |
| lineage3 | 5 |
| lineage4 | 2 |
| lineage4.4.1.1 | 3 |
| lineage3.1 | 1 |
| lineage2.2 | 3 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage3.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage6.1.3 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175513 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR1063896 | Sensitive | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR1180399 | Sensitive | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4821143 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5431730 | Other | La1.8.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR067712 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341330 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR12416842 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None |
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