EBG00000313339 - n.2107A>C
Drug resistance types
68 Sensitive
12 RR-TB
44 HR-TB
18 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4.8 | 14 |
| lineage2.2.1 | 22 |
| lineage4 | 54 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.2 | 2 |
| 42 | |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.9 | 42 |
| La1.8.1 | 3 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 2 |
| lineage1.1.2 | 5 |
| lineage6 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage5.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.2.1 | 1 |
| La2 | 1 |
| lineage1.1.3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 6 |
| lineage1.2.2.2 | 2 |
| lineage2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.6 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 245 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796629 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR10796573 | Other | lineage4.8 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796621 | Other | lineage4.8 | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3797063 | HR-TB | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4627369 | Other | La1.8.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR736848 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9787362 | Sensitive | lineage6 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808805 | Sensitive | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14801749 | Sensitive | None | ERR4814843 | Other | lineage1.1.3 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR8692783 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692810 | Other | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692782 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692823 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | ERR4815281 | Other | lineage4.4.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692878 | Other | lineage4.9 | None | SRR8692907 | Other | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692838 | Other | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692899 | Other | lineage4.9 | None | ERR4815640 | Other | lineage3 | gb | ERR4815669 | HR-TB | lineage1.2.2.2 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675270 | HR-TB | None | ERR4816184 | Other | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815921 | Other | lineage4.3.3 | gb | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816397 | Other | lineage1.1.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2229760 | Other | lineage4.8 | dk | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2510820 | Other | lineage4.8 | None | ERR4818084 | Other | lineage3.1.1 | gb | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818192 | Other | lineage4.1.2.1 | gb | ERR4819051 | Other | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818440 | Other | lineage6.3.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341456 | Other | None | ERR4820746 | RR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819424 | Other | lineage4.8 | gb | ERR4819528 | RR-TB | lineage3 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4820586 | Other | lineage3 | gb | SRR5341461 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4822179 | Sensitive | lineage3 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6511621 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9613540 | Sensitive | lineage4.6.2.2 | None | SRR7131096 | Other | lineage4.8 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None |
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