Rv3596c - c.1395A>G
Drug resistance types
99 Sensitive
5 RR-TB
62 HR-TB
15 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 143 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 6 |
| lineage4.8 | 3 |
| La2;lineage4.9 | 1 |
| lineage2.2.1 | 15 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage4.9 | 8 |
| 3 | |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.1.1.3 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2 | 4 |
| lineage2.2.1.1 | 1 |
| lineage3 | 3 |
| La1.6;lineage4 | 1 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR736848 | Other | lineage4.9 | None |
| SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| SRR1184021 | Sensitive | lineage4.9 | None |
| SRR5341300 | HR-TB | lineage4.9 | None |
| ERR4799025 | Other | lineage4.8 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| ERR4831616 | MDR-TB | lineage2.2.1 | None |
| SRR9971150 | RR-TB | lineage4.8.1 | None |
| ERR4814734 | Other | lineage1.2.1.1 | None |
| ERR6359066 | HR-TB | lineage4.9 | None |
| SRR3675235 | Sensitive | lineage4.9 | None |
| ERR9787256 | Other | lineage6.1.3 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR181887 | Other | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| ERR502510 | Sensitive | lineage4.9 | None |
| ERR3283030 | HR-TB | lineage4.9 | None |
| ERR3283014 | Sensitive | La3;lineage4.9 | None |
| SRR10315751 | MDR-TB | lineage4.8 | None |
| SRR1180420 | Sensitive | lineage4.9 | None |
| SRR8692887 | Other | None | |
| SRR29097058 | Other | lineage4.9 | None |
| SRR1181283 | Sensitive | lineage4.9 | None |
| ERR926158 | Sensitive | lineage4.9 | None |
| ERR4818252 | Sensitive | lineage4.1.1.2 | None |
| ERR4797184 | Sensitive | lineage4.9 | None |
| ERR124636 | Sensitive | lineage4.9 | None |
| ERR216938 | HR-TB | La1.7;lineage4.9 | None |
| SRR10315567 | HR-TB | lineage2.2.1 | None |
| ERR6866125 | Sensitive | lineage4.1.2.1 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| ERR926161 | Sensitive | lineage4.9 | None |
| SRR6044876 | Sensitive | lineage4.9 | None |
| SRR6789624 | HR-TB | lineage4.1.1.3 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| ERR1063862 | HR-TB | lineage4.9 | None |
| ERR3273109 | HR-TB | lineage4 | None |
| ERR926163 | Other | lineage4.9 | None |
| ERR751326 | Other | lineage4.9 | None |
| ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
| SRR26399265 | Other | lineage2.2.1 | None |
| SRR1183054 | Sensitive | lineage4.9 | None |
| SRR5341303 | Sensitive | lineage4.9 | None |
| SRR1181349 | Sensitive | lineage4 | None |
| ERR4819877 | HR-TB | lineage4.9 | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR4799378 | Sensitive | lineage4.9 | None |
| ERR4816478 | HR-TB | lineage4 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| SRR5341453 | Other | lineage4.9 | None |
| ERR926154 | Sensitive | lineage4.9 | None |
| ERR926164 | Other | lineage4.9 | None |
| ERR8479578 | Sensitive | lineage1.1.3.1 | None |
| ERR4816656 | Other | lineage4.9 | None |
| ERR3797047 | MDR-TB | lineage4.9 | None |
| SRR3675246 | Other | lineage4.9 | None |
| ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR9970979 | Sensitive | lineage4.8 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR1175512 | Sensitive | lineage4.9 | None |
| ERR3797065 | RR-TB | lineage4.9 | None |
| ERR5311094 | HR-TB | lineage4.9 | None |
| SRR11972367 | Sensitive | lineage2.2.1 | None |
| SRR9971080 | RR-TB | lineage2.2.1 | None |
| SRR1180413 | Sensitive | lineage4.9 | None |
| ERR323085 | Sensitive | lineage4.9 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| ERR779852 | Sensitive | lineage4.9 | None |
| SRR9971112 | Other | lineage2.2.1 | None |
| SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
| ERR3283057 | Sensitive | La3;lineage4.9 | None |
| SRR5341469 | HR-TB | lineage4.9 | None |
| SRR5341456 | Other | lineage4.9 | None |
| ERR11465510 | Sensitive | lineage4.3.4.2.1 | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR1180996 | Sensitive | lineage4.9 | None |
| SRR1181402 | Sensitive | lineage4.9 | None |
| ERR4831621 | MDR-TB | lineage2.2.1.1 | None |
| ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| ERR405209 | Sensitive | La1.7;lineage4.9 | None |
| ERR3797087 | Sensitive | lineage4.9 | None |
| ERR9786076 | Sensitive | lineage3 | None |
| SRR1180355 | Sensitive | lineage4.9 | None |
| SRR1180312 | Sensitive | lineage4.9 | None |
| SRR28351554 | Sensitive | La1.6;lineage4 | None |
| ERR2693252 | Sensitive | lineage4.9 | None |
| SRR6045795 | Sensitive | lineage2.2.1 | None |
| SRR1175513 | Sensitive | lineage4.9 | None |
| ERR4819809 | HR-TB | lineage4.6.2.2 | None |
| ERR6866807 | Other | lineage4.9 | None |
| ERR1063858 | HR-TB | lineage4.9 | None |
| ERR3806850 | HR-TB | lineage4.1.2.1 | None |
| SRR7236177 | Other | La1.8.1 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| ERR926155 | Sensitive | lineage4.9 | None |
| ERR4796577 | HR-TB | None | |
| ERR9786911 | HR-TB | lineage4.1.2.1 | None |
| ERR4819241 | Other | lineage4.9 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| SRR1180406 | Sensitive | lineage4.9 | None |
| SRR10808668 | Sensitive | lineage2.2.1 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| SRR1180345 | Other | lineage4.9 | None |
| SRR1180375 | Sensitive | lineage4.9 | None |
| SRR1180300 | Sensitive | lineage4.9 | None |
| SRR1180946 | Sensitive | lineage2;lineage4.9 | None |
| SRR6046210 | Other | lineage4.9 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR1791747 | Other | La1.8.1 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| SRR5341310 | Other | lineage1.1.2 | None |
| ERR6866410 | Sensitive | lineage4.9 | None |
| ERR702405 | Sensitive | lineage4.9 | None |
| SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR6045548 | Sensitive | lineage4.9 | None |
| SRR5341425 | Other | lineage4.9 | None |
| ERR4798099 | Other | lineage4.9 | None |
| SRR29097004 | Other | lineage3 | None |
| ERR926160 | Sensitive | lineage4.9 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| ERR2446566 | Other | lineage4.9 | None |
| ERR1063855 | Other | lineage4.9 | None |
| ERR3797015 | HR-TB | lineage4.9 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| ERR1063883 | HR-TB | lineage4.9 | None |
| SRR1180148 | Sensitive | lineage4.9 | None |
| ERR4821655 | HR-TB | lineage4.9 | None |
| SRR5341366 | Sensitive | lineage4.9 | None |
| SRR29096879 | Sensitive | lineage4.9 | None |
| SRR7240033 | Other | La1.2;La1.8.1 | None |
| SRR14801749 | HR-TB | lineage4.9 | None |
| ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
| ERR3797019 | Other | La1.8.1 | None |
| SRR29050859 | Other | lineage4.9 | None |
| ERR3283047 | Sensitive | La3;lineage4.9 | None |
| ERR3797063 | Sensitive | La3;lineage4.9 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR10808399 | Sensitive | lineage4.9 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| ERR3283021 | HR-TB | lineage4.9 | None |
| DRR188519 | Other | lineage4.4.2 | None |
| SRR1180319 | Sensitive | lineage4.9 | None |
| ERR926159 | Sensitive | lineage4.9 | None |
| SRR29096659 | Sensitive | lineage4.9 | None |
| ERR108471 | HR-TB | lineage4.9 | None |
| ERR971389 | Sensitive | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| ERR6866639 | Other | lineage4.9 | None |
| SRR29096179 | Sensitive | lineage4.9 | None |
| ERR1063849 | HR-TB | lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| SRR21677886 | Sensitive | lineage4.9 | None |
| SRR1172796 | Sensitive | lineage2.2.1.2 | None |
| SRR1180399 | Sensitive | lineage4.9 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR1034634 | HR-TB | lineage4.9 | None |
| SRR9971113 | Other | lineage2.2.1 | None |
| SRR5341467 | Other | lineage4.9 | None |
| SRR6044835 | Other | lineage4.9 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| SRR3675585 | Sensitive | lineage4.9 | None |
| ERR212125 | HR-TB | lineage4.9 | None |
| SRR5341298 | Sensitive | lineage4.9 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| SRR6045892 | Sensitive | lineage4.9 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| ERR6359082 | Other | lineage4.9 | None |
| ERR4797264 | Sensitive | lineage4.9 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| ERR4800527 | MDR-TB | lineage2.2.1 | None |
| ERR4024991 | Other | lineage4.8;lineage4.9 | None |
| ERR181824 | HR-TB | lineage4.9 | None |
| ERR176778 | HR-TB | lineage4.9 | None |
| ERR3283055 | HR-TB | lineage4.9 | None |
| ERR926156 | Sensitive | lineage4.9 | None |
| ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
| ERR4797474 | Sensitive | lineage4.9 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| ERR6866022 | Other | lineage4.8;lineage4.9 | None |
| ERR736875 | HR-TB | lineage4.9 | None |
| ERR926165 | Sensitive | lineage4.9 | None |
| SRR6045217 | Sensitive | lineage4.9 | None |
| ERR4796254 | Sensitive | lineage4.9 | None |
| SRR1180410 | Sensitive | lineage4.9 | None |
| ERR926157 | Sensitive | lineage4.9 | None |
| SRR1158918 | Sensitive | lineage4.9 | None |
| SRR1175506 | Sensitive | lineage4.9 | None |
| SRR1180250 | Other | lineage4.9 | None |
| SRR1181325 | Sensitive | lineage4.9 | None |
| ERR137286 | Other | lineage4.9 | None |
| ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
| ERR323066 | Sensitive | lineage4.9 | None |
| ERR3283040 | HR-TB | lineage4.9 | None |
| SRR5341373 | Other | lineage4.9 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| ERR4769439 | HR-TB | lineage4.9 | None |
| SRR28351347 | Other | lineage3 | None |
| SRR1175127 | Other | lineage2.2.1.2 | None |
| SRR9971041 | MDR-TB | lineage4.3.3 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
| ERR3283028 | Other | La3;lineage4 | None |
| ERR1063896 | Sensitive | None | |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR502511 | Sensitive | lineage4.9 | None |
| SRR1180391 | Sensitive | lineage4.9 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| SRR1180444 | Sensitive | lineage4.9 | None |
| ERR4831620 | MDR-TB | lineage2.2.1 | None |
| SRR1159378 | Other | lineage4.9 | None |
| SRR5535933 | Other | lineage4.9 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| ERR9786592 | Other | lineage4.3.4.2 | None |
| ERR4820773 | HR-TB | lineage4.9 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
| ERR6358979 | Other | lineage4.9 | None |
| ERR323108 | HR-TB | La1.7;lineage4.9 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| ERR926162 | Sensitive | lineage4.9 | None |
| ERR4831617 | MDR-TB | lineage2.2.1 | None |
