Rv0006 - c.1419G>A
Drug resistance types
12 Sensitive
2 RR-TB
85 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| 66 | |
| lineage4.1 | 2 |
| lineage4 | 11 |
| lineage4.1.1.3 | 1 |
| lineage4.5 | 3 |
| lineage4.1.1 | 1 |
| lineage4.9 | 12 |
| lineage2.2.1 | 6 |
| lineage3 | 2 |
| lineage4.1.2.1 | 7 |
| lineage3.1 | 2 |
| lineage4.3.3 | 3 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9;lineage4.6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675222 | Other | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5073908 | HR-TB | lineage4.5 | vn | SRR5065508 | HR-TB | lineage4.5 | vn | ERR2229143 | Other | lineage4.1.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR6359082 | Other | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045519 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045952 | HR-TB | None | ERR5311090 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR323038 | HR-TB | None | SRR6325448 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1034652 | Other | None | ERR3445503 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10809074 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172310 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6797502 | Sensitive | lineage4.5 | None |
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