EBG00000313325 - n.140T>C


Drug resistance types
92 Sensitive 7 RR-TB 21 HR-TB 26 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.8 6
lineage4.9.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage4.9 3
lineage4.9 140
lineage4.1;lineage4.9 2
lineage4.1.2.1 11
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.4.2 1
lineage4.1.1.3;lineage4.9 2
lineage2.2.1 11
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage3 1
lineage2.2.1;lineage4 2
lineage2.2;lineage4.9 1
lineage4.1.1.3 2
lineage4.5 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2;lineage4.9 1
lineage4.3.2 1
lineage4.3.2.1 3
lineage4.2.1 3
lineage2.2 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4 2
lineage4.7 2
La1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
La1.3 2
lineage4.4.1.1.1 1
lineage4.2.2.2 1
lineage4.8.1 3
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.3.3 3
lineage4.3.4.2.1 1
lineage4.4.1.1 2
lineage1.1.3.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.2 2
M.canetti;lineage4.2 1
lineage3;lineage4.9 1
La1.8.1 2
lineage5.1.4 1
1
lineage4.1.1.1 1
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.1 1
lineage1.1.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 242
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR363500 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR363479 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR369162 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR369158 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
SRR1175487 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4818272 Other lineage4.3.2 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4814905 Sensitive lineage4.8 gb
ERR369156 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR369159 Other lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363456 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
ERR4821288 Other lineage4.7 None
ERR349300 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR373945 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR867566 Other lineage4.9 None
ERR4769453 Other La1.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4821718 Sensitive lineage4.2.2.2 gb
ERR363421 Other lineage4.9 None
ERR11465604 HR-TB lineage4.8.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR2600612 Sensitive lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR5341323 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR1172885 HR-TB lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR3675541 Sensitive lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1180391 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341396 Other lineage3;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1791725 Other La1.8.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR867569 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
SRR12708416 Sensitive None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR7069473 Other lineage4.1.1.2 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR20969708 HR-TB lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4816571 Sensitive lineage1.1.2 None
ERR4799025 Other lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
SRR14782054 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4829360 Sensitive lineage4.7 None
SRR7240476 Other La1.8.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR3675548 Sensitive lineage4.9 None
SRR3675245 Other lineage4.1.2.1 None
SRR1181283 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR349264 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
SRR1180250 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR6358951 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4769444 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None