EBG00000313325 - n.140T>C


Drug resistance types
126 Sensitive 9 RR-TB 43 HR-TB 15 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
35
lineage2.2.1.2 2
lineage4.9 102
lineage4 63
lineage4.9;lineage2.2 1
lineage2.2 4
lineage4.4.1.1.1 1
lineage2 1
lineage4.2.1 3
lineage2.2.1.1 2
La1.8.1 2
lineage2.2.1 14
lineage4.1 3
lineage4.8 8
lineage4.1.1.3 4
lineage4.1.2.1 12
lineage4.1.1 1
lineage1.1.2 2
lineage3 4
lineage4.1.2 1
lineage4.3.2 1
lineage4.3.2.1 6
lineage5.1.4 1
lineage4.3.4.2.1 1
lineage4.3.3 4
lineage1.1.3.1 2
La3 1
lineage4.7 2
lineage4.2.2.2 1
lineage4.8.2 1
lineage4.5;lineage2.2 1
lineage4.2.1.1 1
lineage4.8.1 1
lineage4.4.2 1
lineage4.9.1 1
La1.3 2
La1.2 1
lineage4.5 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 295
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173740 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172885 HR-TB lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175500 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR14782405 HR-TB None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR1791725 Other La1.8.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR12708416 Sensitive lineage4.1 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR158583 HR-TB None
SRR3675477 Other lineage4.9 None
ERR4815278 Other lineage4.8 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR4815310 Other None
ERR4815471 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4815714 Sensitive lineage4.1.2.1 gb
ERR3275450 Other lineage4 None
SRR3675229 Other lineage4 None
SRR3675247 Other lineage4.9 None
ERR1750908 Sensitive lineage4 None
SRR3675249 Sensitive lineage4.9 None
ERR4815502 Other lineage4.1 None
ERR4815550 Other lineage4 None
SRR3675265 Other lineage4 None
SRR3675270 HR-TB None
SRR3675279 Other None
SRR3675292 Sensitive lineage4 None
SRR3675245 Other lineage4.1.2.1 None
SRR3675266 Sensitive lineage4.9 None
ERR4814905 Other lineage4.8 gb
SRR3675283 Sensitive lineage4.9 None
SRR3675502 Other None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
ERR4816998 Sensitive lineage4.1.2.1 gb
SRR3675522 Other None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
SRR3675550 Other None
ERR4816417 Other lineage4.9 None
ERR2229198 MDR-TB lineage4.8 None
ERR216965 HR-TB lineage4.9 None
ERR4816571 Other lineage1.1.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817998 Other lineage3 None
ERR4817948 Other lineage3 gb
ERR4818232 Other lineage4.1.2 gb
ERR2446566 Other lineage4.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR1035162 Other None
ERR4818536 Other lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818272 Other lineage4.3.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819206 Other lineage4.8 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4819357 Other lineage4.9 None
SRR5341396 Other lineage4 None
ERR2515444 Sensitive lineage4.3.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4819462 Other lineage4 None
SRR5341418 Other None
ERR4820484 Other lineage4.8 None
ERR6359082 Other lineage4.9 None
ERR2446382 Other lineage4 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819933 Other lineage4.9 None
ERR4819952 Sensitive La3 None
SRR5341323 Sensitive lineage4 None
ERR4821769 Other lineage4.1.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2517475 Other lineage4 None
ERR4821288 Other lineage4.7 None
ERR4821811 RR-TB lineage4.9 None
SRR6045503 HR-TB None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821345 Sensitive lineage2.2.1 gb
ERR4822138 Other lineage4.1.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR5818448 Other lineage4.9 None
ERR4821718 Other lineage4.2.2.2 gb
ERR4821725 Other lineage4.8.2 gb
SRR5818466 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6045053 Other None
SRR6046497 Other lineage4.9 None
SRR6046046 Other None
SRR6046245 Other lineage4.9 None
SRR6046362 HR-TB None
ERR2851356 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046250 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
ERR4829360 Sensitive lineage4.7 None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046839 Other lineage4.9 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
ERR4831638 Sensitive None
ERR502470 RR-TB lineage4.9 None
ERR4831777 MDR-TB lineage2.2.1.1 vn
ERR4831763 HR-TB lineage4.5;lineage2.2 None
SRR6982141 RR-TB lineage4.3.3 None
ERR4831826 MDR-TB lineage2.2.1 vn
ERR502889 Other None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6832787 RR-TB lineage2.2.1 None
SRR6855734 Sensitive lineage4.3.2.1 None
ERR502943 HR-TB None
SRR9971150 RR-TB lineage4.8.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR037234 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR067681 HR-TB None
ERR037504 Other lineage4.9.1 None
ERR1063855 Other lineage4 None
ERR133986 HR-TB None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796634 Other lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283033 Sensitive lineage4.9 None
ERR3283021 HR-TB None
ERR3439432 Other None
ERR3283046 MDR-TB lineage4.9 None
ERR349296 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363445 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR473323 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769453 Other La1.3 None
ERR4769457 Other lineage4.9 None
ERR4769452 HR-TB None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769450 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4796351 MDR-TB lineage4.9 None
ERR4797313 HR-TB None
ERR4798406 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798431 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR6358951 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR9117747 HR-TB lineage4.8 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None