Rv0668 - c.1422C>G
Drug resistance types
60 Sensitive
19 RR-TB
149 HR-TB
23 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| 106 | |
| lineage4 | 35 |
| lineage4.9 | 96 |
| lineage4.1.1.3 | 3 |
| lineage4.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 25 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage3 | 9 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 3 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 16 |
| La1.8.1 | 5 |
| lineage4.8 | 4 |
| lineage2.1 | 2 |
| lineage1.1 | 1 |
| lineage2.2 | 6 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3.1 | 2 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.2 | 2 |
| lineage4.6.1.1 | 2 |
| La1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 2 |
| La1.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.5 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage2.2.2 | 3 |
| lineage6 | 2 |
| lineage2 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 372 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR234659 | HR-TB | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2446144 | Other | lineage3 | nl | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341408 | Sensitive | lineage3 | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR5341330 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR2660539 | Other | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2851356 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046514 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046824 | HR-TB | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831724 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4831777 | MDR-TB | lineage2.2.1.1 | vn | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7585435 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR133986 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6358837 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9119669 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787336 | Other | lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1140736 | RR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861288 | Other | lineage4.9 | None | SRR13837543 | Sensitive | lineage4.9 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13837710 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861296 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861420 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1640750 | HR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1791696 | Other | La1.8.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814331 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675502 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675279 | Other | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR3275220 | Other | lineage3 | nl | SRR3675542 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None |
|---|
