EBG00000313325 - n.644A>G


Drug resistance types
24 Sensitive 17 RR-TB 60 HR-TB 30 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 53 Other
lineage Counts
lineage Count
lineage4.6.3;lineage4.9 2
lineage4.9 56
La1.7;lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.8 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage3 2
La1.6;La3;lineage4.9 2
lineage2.2.1 10
lineage3.1.2.2 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.2.2 2
lineage4.2;lineage4.9 1
lineage6.1.3 2
lineage4.3.4.2 1
lineage6.1.2 1
La1.7;lineage4.9 7
lineage2.2.1.1 3
La1.8.1 3
lineage2.2 4
lineage4.4.2 1
lineage4 3
lineage1.1.2 2
La1.7;M.canetti;lineage4.9 2
lineage2.2.1.2 2
lineage4.3.4.1 5
lineage4.4 1
La3;M.canetti;lineage4.9 1
lineage3.1.2.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage6.1.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 2
lineage4.3.4.2.1 2
lineage4.1.2.1 4
La1.7.1;lineage4.9 1
lineage1.1.1 2
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9;lineage7 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 1
lineage4.6.1.1 2
lineage2.1;lineage4.9;lineage7 1
La1.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.8.1 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 3
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage1;lineage4.9 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage4.9 1
La2;lineage4.9;lineage9 1
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9.1 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.9;lineage9 1
1
lineage3.1;lineage9 1
La1.2.BCG 1
lineage4.3.4 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 190
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769457 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR4769452 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR11972367 Sensitive lineage2.2.1 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR1791725 Other La1.8.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR245675 Sensitive lineage1.1.2 None
ERR9786639 Sensitive lineage4.8 None
ERR12328189 Sensitive lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR6045010 Sensitive lineage4.9 None
ERR11466070 Sensitive lineage4.3.4.1 None
SRR5341306 Pre-XDR-TB lineage4.4 None
SRR6045217 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR11466444 Sensitive lineage4.3.4.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR7240476 Other La1.8.1 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR176777 Sensitive lineage4.3.4.2.1 mw
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR2101360 MDR-TB lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4817554 Other lineage1.1.1 None
SRR5341293 Sensitive lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR4769450 Other lineage4.9 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR7341695 MDR-TB lineage4 ro
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4819051 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR5486877 MDR-TB lineage4 None
SRR5341330 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR11465604 HR-TB lineage4.8.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR176778 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675582 Other lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR5431730 Other La1.8.1 None
ERR176751 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
ERR987722 MDR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866807 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4810624 MDR-TB lineage2.2 None
ERR4769421 Other La1.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR6046492 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR26936983 MDR-TB lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341400 Sensitive lineage4.9 None