EBG00000313325 - n.644A>G
Drug resistance types
21 Sensitive
0 RR-TB
80 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| lineage3 | 5 |
| lineage4 | 20 |
| lineage1.1.2 | 2 |
| lineage4.2.1 | 1 |
| lineage1.1.1 | 2 |
| 68 | |
| lineage4.4 | 1 |
| lineage2.2.1 | 7 |
| La1.8.1 | 2 |
| La2 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2 | 5 |
| lineage4.3.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4.6.1 | 2 |
| La1.2 | 2 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.5 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1.2 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817807 | Sensitive | lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | ERR2693231 | Other | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341470 | HR-TB | None | SRR5486877 | MDR-TB | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | ERR2693257 | Other | None | ERR2693232 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6045233 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046046 | Other | None | SRR6046492 | Other | None | SRR6046737 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR8217918 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046878 | HR-TB | lineage4 | None | SRR7341695 | MDR-TB | lineage4 | ro | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1063862 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283041 | Other | lineage4.9 | None | ERR10748111 | MDR-TB | lineage4.3.2 | None | ERR3283025 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283024 | Other | None | ERR3445503 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797086 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4423674 | MDR-TB | lineage4.6.1 | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769421 | Other | La1.2 | None | ERR4769427 | Other | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769521 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798504 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR736835 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR8774326 | MDR-TB | lineage4.6.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | ERR987722 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR1791725 | Other | La1.8.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176778 | HR-TB | None | ERR176777 | Sensitive | lineage4.3.4.2.1 | mw | ERR176779 | HR-TB | None | SRR3675234 | Other | None | SRR3105776 | Pre-XDR-TB | lineage1.1.2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR1750937 | Sensitive | lineage4.4.1.1 | za | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176751 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None |
|---|
