EBG00000313325 - n.644A>G
Drug resistance types
24 Sensitive
17 RR-TB
60 HR-TB
30 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| La1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 1 |
| lineage2.2.1 | 10 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage6.1.1 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 7 |
| La1.8.1 | 3 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage6.1.2 | 1 |
| lineage4.3.4.1 | 5 |
| lineage2.2 | 4 |
| lineage4 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| 1 | |
| lineage1.1.2 | 2 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.8.1 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage4.6.3;lineage4.9 | 2 |
| La2;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 2 |
| La1.6;La3;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9.1 | 1 |
| lineage6.1.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 190 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341330 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | SRR6045217 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR176777 | Sensitive | lineage4.3.4.2.1 | mw | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR3801503 | Other | lineage4.6.2.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR6044875 | Other | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR987722 | MDR-TB | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR5341373 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5486877 | MDR-TB | lineage4 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR4769450 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR7341695 | MDR-TB | lineage4 | ro | DRR188519 | Other | lineage4.4.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR752229 | Other | lineage4.5 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR12328189 | Sensitive | lineage2.2.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4769421 | Other | La1.2 | None |
|---|
