lineage | Count |
---|---|
lineage4 | 64 |
70 | |
lineage4.9 | 26 |
lineage2.2.1.2 | 2 |
lineage4.4.1.1.1 | 2 |
lineage2.2 | 6 |
lineage2.2.1 | 7 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 3 |
lineage2.1 | 2 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage4.6.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.4.2 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage6.1.1 | 2 |
lineage4;lineage3.1 | 1 |
La1.3 | 5 |
lineage4.9;La1.3 | 1 |
lineage3.1.2 | 1 |
lineage4.3.4 | 1 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage4.3.4.2 | 2 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 212 |
ID | Drug resistance | Lineage | Country iso2 | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR176778 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | ERR181887 | HR-TB | None | ERR212001 | HR-TB | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | SRR5341425 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6046046 | Other | None | SRR6044780 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR294266 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323045 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323053 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR1063896 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR473332 | Other | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769450 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR6358979 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | ERR9634265 | Sensitive | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None |
---|