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SRA data
Rv3596c
- c.1377A>G
Drug resistance types
77 Sensitive
12 RR-TB
75 HR-TB
36 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
56 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
115
M.canetti;lineage2.1;lineage4.9
22
La3;M.canetti;lineage2.1;lineage4.9
12
lineage2.2.1
8
lineage4
6
lineage4.1.2.1
6
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage2.1;lineage4.9
5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
259
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR188519
Other
lineage4.4.2
None
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034634
HR-TB
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063846
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063896
Sensitive
None
ERR108471
HR-TB
lineage4.9
None
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