lineage | Count |
---|---|
45 | |
lineage4.9 | 30 |
lineage4 | 26 |
lineage4.7 | 1 |
La1.8.1 | 1 |
lineage4.4.2 | 1 |
lineage2.2 | 5 |
La1.2 | 1 |
lineage2.2.1 | 5 |
lineage4.3.4 | 2 |
lineage3 | 4 |
lineage4.5 | 1 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage2.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 127 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323045 | HR-TB | None | SRR8600130 | Other | La1.8.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4769521 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9119669 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR181744 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | ERR212034 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | ERR4820979 | Other | lineage3 | None | SRR5535933 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None |
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