Rv0006 - c.1296C>G


Drug resistance types
6 Sensitive 5 RR-TB 62 HR-TB 12 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
La1.7;lineage4.9;lineage7 3
lineage4.9 52
lineage4 3
La3;M.canetti;lineage4.9 2
lineage2.2 2
lineage2.2.1 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 2
lineage1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 12
5
La3;lineage4.3.4 1
lineage4.9;lineage6.3 4
La3;lineage4.9 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.2.1 3
La1.7;M.canetti;lineage4.9 2
La3;M.canetti;lineage3.1 1
lineage4.1.1.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 4
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.1.1.1 1
La3 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.2;lineage4 1
lineage4.3.4.2.1 1
lineage1.2.1.2 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage4.3.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage4.9;lineage9 1
M.canetti;lineage4.9 2
La1.7.1;lineage4.9 1
lineage2.2.1.2 1
lineage3.1 1
La3;lineage2 1
La3;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
spoligotype Counts
spoligotype Count
None 165
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1169194 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR13861146 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR9786444 Sensitive lineage4.8 None
ERR2027263 Other lineage4 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789626 Other None
ERR4769450 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR6789621 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR176779 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1184346 HR-TB lineage3.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7131023 Other lineage4.1.2.1 None
SRR20970016 Other lineage2.2 None
SRR13861400 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR1173118 Other lineage2.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1184372 MDR-TB None
SRR3675510 Sensitive La3;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819241 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None