Rv0006 - c.1296C>G
Drug resistance types
8 Sensitive
3 RR-TB
77 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 7 |
| 78 | |
| lineage2.1 | 3 |
| lineage2 | 3 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2.2 | 2 |
| lineage4.3.3 | 5 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4 | 15 |
| lineage1.1.2 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.9 | 19 |
| lineage3.1 | 4 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1 | 1 |
| La1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 157 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003019 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | ERR4816009 | Other | lineage1.1.2 | None | SRR3675510 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR2027263 | Other | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | ERR4816656 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341313 | HR-TB | None | SRR5341302 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR6044790 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045053 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323038 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323045 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034634 | HR-TB | None | ERR323063 | HR-TB | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1063859 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3797083 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736874 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1173400 | Other | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13837528 | Other | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None | SRR13861322 | Other | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861400 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None |
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