Rv3596c - c.1830C>G
Drug resistance types
9 Sensitive
3 RR-TB
21 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage4.9 | 26 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| lineage3 | 2 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.2 | 3 |
| lineage4.6.5 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage1.1.2 | 1 |
| 1 | |
| lineage4.7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR29096150 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769452 | Other | lineage4.9 | None | SRR1510061 | Other | lineage1.2.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046878 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR9125132 | Other | lineage1.2.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR7236330 | Other | La1.8.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR17658572 | Sensitive | lineage1.1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None |
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