lineage | Count |
---|---|
lineage4.9 | 25 |
lineage3.1.2.1;lineage4 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage4 | 1 |
lineage2.2 | 3 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage2.2.1 | 3 |
La1.2;La1.8.1 | 1 |
lineage4.4.2 | 1 |
lineage2.2.1.2 | 2 |
lineage4.9;lineage7 | 1 |
lineage1.1.3.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
La1.8.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.4 | 1 |
La1.3 | 1 |
La1.4 | 1 |
La1;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage4.8 | 1 |
lineage1.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | ERR4811493 | HR-TB | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675270 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4769450 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR7240476 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR16278274 | Other | La1.4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR22251549 | Other | lineage1.1.1.1 | None | ERR3797046 | HR-TB | lineage4.9 | None |
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