EBG00000313339 - n.2105G>T
Drug resistance types
67 Sensitive
20 RR-TB
35 HR-TB
19 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
88 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 8 |
| lineage4.8 | 13 |
| lineage4.9 | 95 |
| La1;lineage4.9 | 4 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1 | 20 |
| La1.8.1 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage5.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage3.1.1 | 3 |
| La3;lineage4.9 | 7 |
| lineage4 | 3 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.4.2 | 3 |
| La1.3 | 3 |
| lineage6 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2.1 | 3 |
| La1.7;lineage4.9 | 4 |
| lineage4.1.1.3 | 3 |
| lineage1.1.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.8.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.3 | 1 |
| La2 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage6.1.3 | 2 |
| lineage3.1.3 | 1 |
| lineage2.2 | 2 |
| lineage4.1.2 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.2 | 1 |
| 1 | |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.6 | 1 |
| lineage2.2.1.1 | 3 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 238 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | ERR4817915 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR13180204 | Other | lineage3 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR7240476 | Other | La1.8.1 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR4033549 | Other | lineage2.2.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR19303899 | Other | lineage3 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR4769408 | Other | La1.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4798099 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR16156817 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR8692858 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR19304104 | Other | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR4769457 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR10796566 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR2229760 | Sensitive | lineage4.8 | dk | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR9117704 | Other | lineage4.6 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR5341387 | Other | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None |
|---|
