EBG00000313339 - n.606G>A
Drug resistance types
89 Sensitive
25 RR-TB
40 HR-TB
19 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
91 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 67 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 14 |
| lineage4 | 55 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage3 | 14 |
| lineage2.2.1 | 20 |
| lineage4.8 | 4 |
| lineage4.6.1.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.3 | 8 |
| lineage2.2.1.2 | 2 |
| 34 | |
| lineage2.2.1.1 | 2 |
| lineage4.2.1 | 4 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 3 |
| lineage1.1.1 | 1 |
| lineage4.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
| La1.8.1 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage5.1.2 | 1 |
| La1.2 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 280 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR13837646 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199460 | HR-TB | lineage2.2.1.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675477 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR3275450 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4817511 | Other | lineage3 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4818831 | Other | lineage3 | None | ERR4816231 | Other | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818107 | Sensitive | lineage3 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817214 | Other | lineage4.8 | None | ERR4817301 | Other | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4820290 | Other | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR4820503 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | SRR6045503 | HR-TB | None | ERR2517475 | Other | lineage4 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6896545 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR5087842 | Other | La1.8.1 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | ERR502943 | HR-TB | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | DRR185024 | Other | lineage2.2.2 | None | ERR10796597 | Other | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR363421 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4769418 | Other | La1.2 | None | ERR4188172 | Other | La1.8.1 | None | ERR4798431 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None |
|---|
