EBG00000313339 - n.606G>A


Drug resistance types
89 Sensitive 25 RR-TB 40 HR-TB 19 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 91 Other
lineage Counts
lineage Count
34
La1.4 1
lineage4.4.1.1 3
lineage2.2.1 20
lineage1.2.1.2 1
lineage7;lineage2.2.1.2 1
lineage2.2 3
lineage4.1.2.1 14
lineage4.9 67
lineage4.1 2
lineage1.1.1 1
lineage4.6.2.2 2
lineage3.1.2.1 1
lineage4 55
lineage4.8 4
lineage4.1.3;lineage1.1.2 1
lineage3 14
lineage1.1.2 2
lineage4.1.1 1
lineage4.1.3 1
lineage4.3.4.2 1
lineage4.3.2 1
lineage6.3.1 1
lineage4.2.1 4
lineage4.3.3 8
lineage4.3.2.1 3
lineage3.1.1 1
lineage2.2.1.1 2
lineage3.1.2.2 1
lineage4.7 1
lineage1.1.3.1 1
lineage4.1.1.3.1 1
lineage4.9.1 1
lineage4.5;lineage2.2 1
La1.8.1 3
lineage4.6.1.1 4
lineage4.4.2 1
lineage2.2.2 1
lineage4.1.1.3 1
La1.7.X-unk4 1
lineage5.1.2 1
La1.2 3
lineage4.5 2
lineage1.1.1.1 1
lineage4.3.4.2.1 4
lineage4.4.1.1;lineage4.1.2.1 1
lineage2.2.1.2 2
spoligotype Counts
spoligotype Count
None 280
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16156832 RR-TB None
SRR16278274 Other La1.4 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR22424905 RR-TB lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR3675477 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR3675229 Other lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR3675292 Sensitive lineage4 None
SRR3675318 Other lineage4.9 None
ERR3275450 Other lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675245 Other lineage4.1.2.1 None
ERR4815515 Sensitive lineage4.1.3;lineage1.1.2 None
SRR3675270 HR-TB None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR3675387 Sensitive None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
ERR4817511 Other lineage3 None
SRR3675537 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816571 Other lineage1.1.2 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4816231 Other lineage4 None
ERR4816322 Other lineage4.9 None
ERR4816417 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4817214 Other lineage4.8 None
ERR4816852 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817301 Other lineage4.9 None
ERR4818904 Other lineage4.8 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4818272 Other lineage4.3.2 None
ERR2446566 Other lineage4.1 None
ERR4818107 Sensitive lineage3 None
ERR4818831 Other lineage3 None
ERR4818440 Other lineage6.3.1 None
ERR2512770 Other lineage4.2.1 None
SRR5341437 Sensitive lineage4.9 None
ERR4820290 Other lineage3 None
ERR4819383 RR-TB lineage4.9 None
SRR5341456 Other None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4820503 Other lineage2.2.1 None
ERR4818570 Other lineage4.3.3 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341396 Other lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR6152838 Other lineage2.2.1.1 ca
SRR5341296 Sensitive lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR2446382 Other lineage4 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341323 Sensitive lineage4 None
ERR4820030 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
ERR4821769 Other lineage4.1.2.1 None
ERR2517475 Other lineage4 None
SRR6045503 HR-TB None
SRR6045642 Other lineage3.1.2.2 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821616 Other lineage1.1.3.1 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045706 Sensitive lineage4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045233 HR-TB None
SRR6045053 Other None
SRR6045124 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6046046 Other None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046250 Other lineage4.9 None
SRR6046291 Other lineage3 None
SRR6046492 Other None
SRR6046299 HR-TB None
SRR6046611 HR-TB lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR6046802 Other lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
ERR4814994 HR-TB lineage2.2.1 gb
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR502479 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831638 Sensitive None
SRR6896545 Other lineage4.9 None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
ERR2503533 Other lineage4.1.2.1 fi
SRR7131047 MDR-TB lineage4.3.3 None
ERR5087842 Other La1.8.1 None
SRR7131050 MDR-TB lineage4.3.3 None
SRR6832644 Other lineage4.3.3 None
ERR502943 HR-TB None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
DRR188519 Other lineage4.4.2 None
DRR184629 Other lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796597 Other lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR3283006 RR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3283055 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283032 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445504 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797067 Other La1.8.1 None
ERR3797046 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797062 RR-TB lineage4.9 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR4769427 Other La1.2 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188172 Other La1.8.1 None
ERR4769418 Other La1.2 None
ERR4769457 Other lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769530 RR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769508 RR-TB lineage4.9 None
ERR4797350 Sensitive lineage4.9 None
ERR4797313 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4798431 HR-TB None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4811030 Sensitive None
ERR4811031 Sensitive lineage4.5 None
ERR4811493 HR-TB None
ERR6197028 Other lineage4.9 None
ERR4812155 Sensitive None
ERR6197024 RR-TB lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR6865446 Other lineage4.4.1.1 None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR752229 Other lineage4.5 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049672 Other lineage3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1173182 Other lineage4.6.1.1 None
SRR1173719 HR-TB lineage3 None
SRR1173740 Other None
SRR1175496 HR-TB lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR1173281 RR-TB lineage3 None
SRR1173310 MDR-TB None
SRR1173770 Other lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR13837646 Sensitive lineage4.9 None
SRR12199460 HR-TB lineage2.2.1.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR16156697 MDR-TB lineage2.2.1 None