Rv0668 - c.234C>T


Drug resistance types
54 Sensitive 14 RR-TB 104 HR-TB 32 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 164 Other
lineage Counts
lineage Count
110
lineage4 46
lineage4.1.2.1 14
lineage2.2.1 29
lineage4.6.2.2 5
lineage4.9 59
lineage4.7 2
lineage1.1.2 2
lineage3 5
lineage5.2 1
La1.8.1 6
lineage4.9;lineage2.1 1
lineage3.1.1 1
lineage1.2.1.2.1 1
lineage4.4.1.1 2
lineage4.2.1 2
lineage4.3.4.2.1 2
lineage2.2 8
lineage2.2.1.1 1
lineage4.1.2.1.1 1
lineage1.1.3.1 1
lineage4.3.3 7
La2 1
lineage4.1.1.3 3
lineage4.8 11
lineage4.1.2 2
lineage4.3.2.1 3
lineage4.4.1.2 2
lineage4.3.4.1 3
lineage4.4.2 1
lineage3;La3 1
lineage4.3.4.1;La1.7 1
lineage6.1.1 2
lineage4.1.3 2
La1.2 2
La1.3 4
La1 1
lineage4.9;La1.3 1
lineage3.1.2 1
lineage4.5;lineage2.2.1 1
lineage4.5 3
lineage1.1.3.2 1
lineage4.9.1 1
lineage4.3.2 1
lineage4.8;lineage4.1 2
lineage1.1.3 2
lineage4.1 2
lineage6.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.6.1.1 1
lineage4.4.1.1.1 1
La3 1
lineage2.2.1.2 2
lineage3.1 2
lineage2 2
lineage2.1 3
lineage7;lineage2.2.1.2 1
lineage1.2.1.2 1
lineage9;lineage3.1 1
lineage2.2.1;La3 1
lineage4.1.1.1 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage1.2.2 1
lineage4.3 1
lineage4.1;lineage1 1
lineage4;lineage1.1.2 1
lineage4;lineage1.1 1
spoligotype Counts
spoligotype Count
None 386
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341456 Other None
SRR5341425 Other lineage4 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341300 Other lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341298 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341333 HR-TB None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5341310 Other lineage1.1.2 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR2706950 MDR-TB lineage5.2 cd
ERR6359082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341330 HR-TB None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341366 Sensitive lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5431730 Other La1.8.1 None
SRR5341470 HR-TB None
SRR5341469 Other lineage4 None
SRR6045450 Other lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045519 HR-TB None
SRR5535933 HR-TB None
ERR4821143 RR-TB lineage4.9 None
SRR6045516 Other lineage3.1.1 None
SRR5535683 Sensitive lineage1.2.1.2.1 None
SRR5266542 Pre-XDR-TB lineage2.2.1 ru
SRR6046117 RR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR6044838 Other lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821578 Other lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6044790 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6045957 Other lineage4.9 None
SRR6045053 Other None
SRR6046066 HR-TB None
SRR6045267 RR-TB lineage4 None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045399 Other None
SRR6046250 Other lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046305 Other lineage4.9 None
ERR4830353 Other None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046397 Other None
SRR6046540 HR-TB None
SRR6046492 Other None
SRR6046521 Other lineage4.4.1.1 None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6511621 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4972574 MDR-TB lineage4.1.2.1.1 None
SRR6785262 Sensitive lineage4.2.1 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6785267 Other lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR6789626 Other None
SRR6785527 Sensitive lineage2.2.1 None
ERR294266 HR-TB None
SRR6797797 Sensitive lineage1.1.3.1 None
SRR6832644 Other lineage4.3.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR5311077 RR-TB La1.8.1 None
SRR8217918 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323066 Sensitive lineage4 None
ERR323039 HR-TB None
ERR323053 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9971122 MDR-TB lineage4.8 None
ERR11466499 Other lineage4.3.4.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR323085 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR1035157 Other lineage4.9 None
ERR1023302 MDR-TB lineage3;La3 None
ERR1035122 Sensitive None
ERR323115 Sensitive lineage4 None
ERR11049020 Other lineage4.8 None
ERR11465024 Other lineage4.1.1.3 None
ERR1063896 Sensitive None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR12015086 Other lineage4.8 None
ERR12015084 Other lineage4.8 None
ERR3283058 Other lineage4.9 None
ERR3273109 MDR-TB lineage4 None
ERR3283027 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3439265 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR349264 Sensitive lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR3468613 RR-TB La1.8.1 None
ERR3797058 Other lineage4.9 None
ERR3797043 HR-TB None
ERR349298 Sensitive lineage4 None
ERR3797046 HR-TB None
ERR3797069 Other None
ERR3797071 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR3797081 Sensitive lineage4 None
ERR4769442 HR-TB lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4024991 Other None
ERR4596910 Sensitive lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4798262 HR-TB La1 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4797474 Other None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4798504 Other lineage3 None
ERR4811105 HR-TB None
ERR4800222 Sensitive lineage1.1.2 None
ERR4811022 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR12015085 Other lineage4.8 None
ERR4810741 HR-TB None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR5336148 Other None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358951 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR6359069 Other lineage4.9 None
ERR702404 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR6866022 Other None
ERR6866639 Other None
ERR736872 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736867 HR-TB None
ERR736865 HR-TB None
ERR9117709 HR-TB None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR7821123 Other lineage1.1.3.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR037504 Other lineage4.9.1 None
ERR9117805 Other lineage4.3.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9657191 Sensitive lineage1.1.3 None
ERR9786443 Sensitive lineage4.8 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786671 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786843 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9787197 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
ERR987733 RR-TB lineage4.6.1.1 None
SRR10315567 Other lineage2.2.1 None
ERR990545 Other lineage3 None
SRR10315751 MDR-TB lineage4.8 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1169249 Other La3 None
SRR1158918 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169306 Other None
SRR1173118 Other None
SRR1172214 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1172717 Other lineage4.9 None
SRR1172728 MDR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172817 HR-TB None
SRR1172146 Sensitive lineage4.9 None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173281 RR-TB lineage3 None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173778 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173740 Other None
SRR1173777 Other lineage4 None
SRR1175074 MDR-TB None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1174897 HR-TB None
SRR1180996 HR-TB lineage4 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175090 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183965 Sensitive lineage4.9 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1196546 HR-TB None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196494 MDR-TB None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR11972258 HR-TB lineage1.1.3 None
SRR12142341 HR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837498 Sensitive lineage4.9 None
SRR13837707 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR18003019 Other lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19295647 Sensitive lineage4.9 None
SRR20969677 HR-TB lineage2 None
SRR20969475 Other lineage1.2.1.2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969731 Other lineage2.2.1 None
ERR4815604 HR-TB None
SRR20970016 Other lineage2.2 None
SRR21677886 Sensitive lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR20969708 HR-TB lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR22424765 MDR-TB lineage4 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3416776 Other lineage2.1 None
SRR3675465 HR-TB None
SRR3675488 HR-TB None
ERR4815225 RR-TB lineage1.2.2 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675221 HR-TB None
ERR4814976 Other lineage4.9 None
SRR3675222 Other None
SRR3675501 HR-TB None
SRR3675236 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
SRR3675270 HR-TB None
SRR3675311 Other None
ERR4815471 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR176568 Other lineage4.3 None
ERR176643 HR-TB None
SRR3675412 Sensitive lineage4.9 None
ERR176740 HR-TB None
ERR4816964 Other lineage4.9 None
ERR176751 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4815944 HR-TB lineage4.1.2.1 None
SRR3675510 Other None
ERR2229542 Other lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR212033 HR-TB None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR4817060 RR-TB None
SRR3675572 Other None
SRR3742665 HR-TB None
ERR4816548 MDR-TB lineage4.5 None
SRR3675571 HR-TB None
ERR4816466 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4818615 Other None
ERR4816585 Other lineage2.2 None
SRR4033483 HR-TB lineage4.3.2.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818021 Other La1.8.1 None
ERR2446566 Other lineage4.1 None
ERR4818347 Other lineage4.1.2 None
ERR4816852 Other lineage4.9 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817735 Other lineage4.8 None
SRR7496472 Other None
ERR4819093 Other lineage4.3.3 None
SRR5341453 Sensitive None
SRR5007188 Other lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819198 Other lineage2.2.1 None
SRR5341387 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None