EBG00000313339 - n.1463G>T
Drug resistance types
147 Sensitive
7 RR-TB
46 HR-TB
25 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;La1.3 | 1 |
| La1.2 | 2 |
| 44 | |
| lineage4 | 100 |
| lineage1.1.2 | 3 |
| lineage4.9 | 53 |
| lineage2.2 | 5 |
| lineage2.2.1 | 26 |
| lineage4.5 | 3 |
| lineage4.1.2.1 | 9 |
| lineage1.1.3.1 | 2 |
| lineage6 | 1 |
| lineage4.8 | 7 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.7 | 3 |
| lineage4.3.3 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.2 | 2 |
| La1.8.1 | 5 |
| lineage4.2.1 | 3 |
| lineage3.1.3 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.1.1 | 3 |
| lineage4.1 | 4 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4;lineage2 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage3 | 8 |
| lineage4.4 | 1 |
| lineage4.5;lineage2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage5.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 333 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798431 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1791725 | Other | La1.8.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814554 | Other | lineage4.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR3275450 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR4815550 | Other | lineage4 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815589 | Sensitive | lineage4.8.2 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4816943 | Sensitive | lineage4.3.3 | gb | SRR3675522 | Other | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816852 | Other | lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2245407 | Sensitive | lineage3.1.1 | no | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR2512770 | Other | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR4818561 | HR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | SRR5341387 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4820290 | Other | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819546 | HR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341425 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | ERR2446382 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341319 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | ERR4821588 | Sensitive | lineage4.1.1.3 | None | SRR5535933 | HR-TB | None | ERR4821286 | Other | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045086 | Other | lineage3 | None | SRR6045217 | Other | lineage4 | None | SRR6045178 | Other | lineage3 | None | SRR6046555 | Sensitive | lineage3.1.1 | gb | SRR6046046 | Other | None | SRR6045295 | Other | lineage4.7 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046299 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046790 | Other | lineage4.7 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR4831716 | HR-TB | lineage1.1.1.1 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR4831877 | HR-TB | lineage2.2.1 | vn | ERR502510 | Sensitive | lineage4 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR502943 | HR-TB | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | ERR036207 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR144568 | Pre-XDR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188035 | Other | La1.8.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None |
|---|
