Rv2477c - c.501G>C
Drug resistance types
21 Sensitive
3 RR-TB
55 HR-TB
11 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
116 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.9 | 58 |
| lineage2.2.1 | 5 |
| M.canetti;lineage4.2 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage5.2 | 2 |
| 11 | |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage2.1;lineage4.9 | 13 |
| M.canetti;lineage2.2 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage6.2.3 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 2 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage4.8 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.4.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage6.1.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.1.2.1 | 11 |
| M.canetti;lineage4.9 | 3 |
| lineage2.2 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage2.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.3 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage3 | 1 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323037 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675221 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR6789621 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675457 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR29051093 | Other | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4819241 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797069 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR11049020 | Other | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR3797070 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR25827682 | Other | None | ERR212001 | HR-TB | None | ERR234659 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786604 | Other | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR702406 | Other | lineage2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None |
|---|
