Rv0701 - c.-50C>T
Drug resistance types
25 Sensitive
1 RR-TB
97 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| 89 | |
| lineage1.2.1.2.1 | 1 |
| lineage4.9 | 23 |
| lineage4.3.4 | 2 |
| lineage4 | 32 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1 | 10 |
| lineage3 | 4 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 4 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| La2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 191 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6358991 | HR-TB | None | ERR6336807 | HR-TB | lineage1.2.1.2.1 | None | ERR736835 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172310 | HR-TB | None | SRR10808805 | Sensitive | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR16156775 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176778 | HR-TB | None | SRR8692887 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | ERR4815310 | Other | None | ERR176740 | HR-TB | None | SRR3675222 | Other | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675502 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212034 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR2510617 | MDR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR1023509 | Other | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341293 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341313 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR6046210 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045399 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | ERR4830353 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046299 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR502889 | Other | None | SRR6831909 | Other | lineage2.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502524 | HR-TB | La2 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR294266 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR067681 | HR-TB | None | ERR323053 | HR-TB | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1034652 | Other | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283055 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769452 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR473367 | Sensitive | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR403298 | HR-TB | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811493 | HR-TB | None |
|---|
