lineage | Count |
---|---|
La3;lineage4.3.4 | 1 |
lineage4.9 | 33 |
lineage2.2.1 | 13 |
lineage4.9;lineage7 | 3 |
lineage4.1.1.3;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.2 | 4 |
La1.7.X-unk4;lineage4.9 | 1 |
La1.7;lineage4.9 | 2 |
lineage1;lineage4.9 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage2.2.1.2 | 1 |
La2;lineage2.2 | 1 |
La2;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.1;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
M.canetti;lineage1 | 1 |
1 | |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.3.4 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage4 | 1 |
lineage4.6.3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6479539 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR5341456 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR29096631 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR29093571 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR1140694 | Pre-XDR-TB | lineage2.2.1 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1062917 | Pre-XDR-TB | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR14334195 | Other | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4769450 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1049688 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR29097054 | Sensitive | lineage4.9 | None | SRR29093330 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675270 | Other | lineage4.9 | None | SRR1049687 | Pre-XDR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR369151 | Other | lineage4.9 | None | SAMN02381027 | Pre-XDR-TB | lineage2.2.1 | ug | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None |
---|