EBG00000313339 - n.545T>G


Drug resistance types
13 Sensitive 17 RR-TB 11 HR-TB 8 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 54 Other
lineage Counts
lineage Count
lineage3.1.2.1 1
lineage3 12
lineage4.1.1.3 2
lineage4.9 18
lineage4.1.1 2
lineage1.1.2 2
lineage4.8 19
lineage2.2.1 7
lineage4 5
10
lineage4.1.1.3.1;lineage3.1.2 1
lineage2.2.1.1 1
lineage4.4.1.1 3
lineage4.3.4.1 1
lineage4.3.4.2.1 1
lineage3.1.1 1
lineage4.4.1.2 1
lineage4.2.1 1
La1.8.1 2
lineage4.1.2.1 3
lineage4.4.2 2
lineage1.1.3.2 1
lineage4.6.1.1 2
lineage2.2 3
lineage2.2.1.2 2
lineage4.3.3 1
lineage4.6.1 2
lineage2.2.2 1
lineage1.2.1.2 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2513413 Other lineage3.1.2.1 None
ERR3275190 Other lineage3 nl
ERR2512423 Other lineage4.1.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR4818179 Other lineage4.1.1 None
ERR4818261 Other lineage1.1.2 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819051 Other lineage4 None
ERR4818952 Other lineage3 None
SRR5341330 HR-TB None
ERR1035138 MDR-TB None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR6152838 Other lineage2.2.1.1 ca
ERR4820723 RR-TB lineage4.4.1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819533 Other lineage1.1.2 None
SAMEA3501070 RR-TB lineage4.8 None
ERR6359082 Other lineage4.9 None
ERR2446509 Other lineage3 nl
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820130 Other lineage3 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821861 Other lineage4.1.1 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR2693227 Other lineage4.9 None
ERR4822217 Sensitive lineage4.3.4.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045976 Sensitive lineage4.9 None
SRR6044904 Other lineage3 None
SRR6045010 Other lineage4 None
SRR6045053 Other None
SRR6046046 Other None
SRR6045159 Other lineage3.1.1 None
SRR6045217 Other lineage4 None
ERR4828879 MDR-TB lineage3 None
SRR6045263 Sensitive lineage4.9 None
SRR6397815 Other lineage4.4.1.1 None
SRR6397733 Other lineage4.4.1.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR8600232 Other La1.8.1 None
SRR8600288 Other La1.8.1 None
SRR6964650 Sensitive lineage3 None
ERR4815783 Other lineage4.1.2.1 gb
ERR323048 Pre-XDR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR017781 Other lineage3 None
ERR019855 Other lineage3 None
ERR2514801 Other lineage1.1.3.2 gb
ERR1199132 Sensitive lineage4.6.1.1 None
ERR4769457 Other lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
SRR1172987 HR-TB lineage4.9 None
ERR2514215 Other lineage2.2.1 gb
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR023450 RR-TB lineage2.2.1 None
SRR023487 RR-TB lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR5865002 MDR-TB lineage4.3.3 None
SRR1172885 HR-TB lineage4.9 None
SRR1173766 Sensitive lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR1173421 RR-TB lineage4.9 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR1173833 Other lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175052 HR-TB lineage4.9 None
SRR14782405 HR-TB None
SRR16156775 Other lineage4.9 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR20969731 Other lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969542 Other lineage4.4.2 None
SAMEA3501065 RR-TB lineage4.8 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR21240055 Other lineage4.1.2.1 None
SAMN02567676 MDR-TB lineage4.6.1 None
SRR3675270 HR-TB None
ERR4814963 Other lineage4.1.2.1 None
ERR2229540 Other lineage4.8 None
ERR2229810 Other lineage4.8 None
ERR2229541 Other lineage4.8 None
ERR2229366 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR2229147 Other lineage4.8 None
ERR4816548 MDR-TB lineage4.5 None
ERR4817109 Other lineage3 None
ERR2229204 Other lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR2229436 Other lineage4.8 None
ERR4817434 Other lineage3 None
ERR2228815 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2228900 RR-TB lineage4.8 None
ERR2228910 Other lineage4.8 None
ERR4816868 Other lineage4.4.1.1 None
ERR2228838 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR2228899 RR-TB lineage4.8 None
ERR4817704 Sensitive lineage4.9 None