EBG00000313339 - n.545T>G
Drug resistance types
13 Sensitive
17 RR-TB
11 HR-TB
8 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 12 |
| lineage4.8 | 19 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.4.1.1 | 3 |
| 10 | |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 7 |
| lineage4.9 | 18 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 5 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| La1.8.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.3.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.6.1 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818952 | Other | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR1035138 | MDR-TB | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820130 | Other | lineage3 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341330 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR2693227 | Other | lineage4.9 | None | ERR4821861 | Other | lineage4.1.1 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4822217 | Sensitive | lineage4.3.4.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045976 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6044904 | Other | lineage3 | None | SRR6045010 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | ERR4828879 | MDR-TB | lineage3 | None | ERR017781 | Other | lineage3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6964650 | Sensitive | lineage3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR8600232 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4769452 | HR-TB | None | ERR019855 | Other | lineage3 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR5865002 | MDR-TB | lineage4.3.3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR2229540 | Other | lineage4.8 | None | SRR20970016 | Other | lineage2.2 | None | SAMN02567676 | MDR-TB | lineage4.6.1 | None | SRR3675270 | HR-TB | None | ERR2229810 | Other | lineage4.8 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4814963 | Other | lineage4.1.2.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR4817109 | Other | lineage3 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4817434 | Other | lineage3 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4817704 | Sensitive | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR3275190 | Other | lineage3 | nl | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818179 | Other | lineage4.1.1 | None | ERR4819051 | Other | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None |
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