EBG00000313339 - n.545T>G
Drug resistance types
10 Sensitive
22 RR-TB
7 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.2 | 2 |
| lineage2.2.1 | 6 |
| lineage4.8 | 39 |
| lineage4.9 | 21 |
| lineage4.1.2.1 | 4 |
| lineage3 | 6 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.6.1.1 | 4 |
| lineage1.1.3.2 | 1 |
| lineage2.2 | 3 |
| lineage4.5 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR4769452 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR21240055 | Other | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR978755 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR20969542 | Other | lineage4.4.2 | None | DRR188519 | Other | lineage4.4.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR2660539 | Other | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR11662690 | HR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR20970016 | Other | lineage2.2 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR5535933 | Other | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2228838 | Other | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR2229204 | Other | lineage4.8 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1238558 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR2228910 | Other | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173421 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4799025 | Other | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR2229540 | Sensitive | lineage4.8 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR978747 | Other | lineage4.8 | None | SRR14782405 | HR-TB | lineage4.9 | None |
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