Rv0667 - c.1401C>T


Drug resistance types
23 Sensitive 131 RR-TB 115 HR-TB 41 MDR-TB 15 Pre-XDR-TB 1 XDR-TB 163 Other
lineage Counts
lineage Count
147
lineage4.2.1 2
lineage2.2.1 34
lineage4.9 151
lineage2.1 2
lineage4.4.1.1 4
lineage7;lineage2.2.1.2 1
lineage4.5 3
lineage2.2 11
lineage4 18
lineage2 3
lineage4.1.1 3
lineage4.8 18
lineage4.3.4.2.1 3
lineage4.1.2.1 16
lineage3 11
lineage4.6.1.2 4
lineage4.1;lineage1 1
lineage4.8;La3 1
La1.8.1 3
lineage4.1.2 1
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage4.7 2
lineage4.9;lineage4.2.1 1
lineage4.6.1 1
lineage5.2 2
lineage4.3.3 4
lineage4.2.1.1 1
lineage4.1 2
lineage4.3 1
lineage4.3.2.1 1
lineage3;La3 1
La1.2 1
lineage4.1.3 2
lineage4.9;La1.3 1
lineage1.2.2.2 1
lineage2.2.2 1
lineage4.3.4 1
lineage1.1.3.2 2
lineage4.6.5 2
lineage1.1.2 1
lineage4.3.2 1
lineage3.1.1 1
lineage4.1.1.3 1
lineage4.8;lineage4.1 2
lineage4.3.4.1;lineage4.3.3 1
lineage4.6.2.2 1
lineage6.3.1 1
lineage6 2
La1.6 1
lineage4.4.1.1.1 1
lineage2.2.1.2 2
lineage2.2.1.1 4
lineage3.1 2
lineage1.2.1.2 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 489
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14782405 HR-TB None
SRR14782539 MDR-TB lineage4.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR15368973 Other None
SRR16156188 HR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16157123 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR19303884 HR-TB None
SRR20969731 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969677 HR-TB lineage2 None
SRR22424787 Sensitive lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR21277755 Sensitive lineage4.5 None
ERR11068570 Other lineage4 None
ERR176793 Other lineage4.1.1 None
ERR11081258 Other lineage4.8 None
ERR176778 HR-TB None
ERR176779 HR-TB None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR4815310 Other None
SAMN02585910 Other lineage2.2.1 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675488 HR-TB None
ERR158583 HR-TB None
SRR3675502 Other None
SRR3675221 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3675501 HR-TB None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3675222 Other None
SRR3675234 Other None
SRR3675236 HR-TB None
SRR3675311 Other None
ERR181824 HR-TB lineage4 None
ERR4815550 Other lineage4 None
SRR3675232 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675270 HR-TB None
SRR3675280 HR-TB lineage4.9 None
ERR176651 HR-TB None
ERR181887 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR4815079 RR-TB lineage3 None
SRR3675456 HR-TB None
ERR212001 HR-TB None
ERR2229542 Other lineage4.8 None
ERR2229084 Sensitive lineage4.8 dk
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675550 Other None
SRR3675555 HR-TB None
ERR212125 HR-TB lineage4 None
ERR4817060 RR-TB None
ERR4817069 RR-TB None
SRR3675572 Other None
SRR3675574 HR-TB None
SRR3675571 HR-TB None
SRR3742665 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4817204 RR-TB lineage4.9 None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR2228899 RR-TB lineage4.8 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228838 RR-TB lineage4.8 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4817735 Other lineage4.8 None
ERR234659 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR1035162 Other None
SRR5485584 Other None
ERR4818347 Other lineage4.1.2 None
ERR4818607 Sensitive lineage4.9 None
SRR5007188 Other lineage4 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818394 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR2513259 Other lineage3 None
SRR5007168 RR-TB lineage4.9 None
ERR4818615 Other None
ERR4818646 Sensitive lineage4.1.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819280 Sensitive lineage4 None
ERR4819383 RR-TB lineage4.9 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341456 Other None
ERR2514327 HR-TB lineage4.8 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341418 Other None
ERR4819781 Other lineage2.2.1 None
SRR5266542 Pre-XDR-TB lineage2.2.1 ru
ERR2514692 Other None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341302 HR-TB None
ERR1023509 Other None
ERR6359082 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5341333 HR-TB None
ERR4820112 Sensitive lineage4.1.1 None
SRR5341330 HR-TB None
SRR5431730 Other La1.8.1 None
ERR2693238 HR-TB lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2693231 Other None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
ERR2693254 Other None
ERR2693230 Other None
SRR6045526 HR-TB None
ERR2693257 Other None
ERR2660539 Other lineage4.9 None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821276 Other lineage3 None
SRR6045053 Other None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR2693232 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046046 Other None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046225 HR-TB None
SRR6045217 Other lineage4 None
SRR6045399 Other None
SRR6046385 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046397 Other None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
ERR4830353 Other None
SRR6046540 HR-TB None
ERR4828879 MDR-TB lineage3 None
SRR6046482 HR-TB None
SRR6046492 Other None
SRR6046824 HR-TB None
ERR485006 HR-TB lineage4.9 None
ERR3078008 MDR-TB lineage4.6.1 None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR502889 Other None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6896383 RR-TB lineage4.4.1.1 None
SRR6785413 Other lineage2.2.1 None
SRR6789626 Other None
SRR6832787 RR-TB lineage2.2.1 None
ERR294266 HR-TB None
ERR502532 HR-TB None
SRR6982141 RR-TB lineage4.3.3 None
SRR6785227 Other lineage2.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6832249 Other lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982246 Sensitive lineage4 None
SRR7131023 Other lineage4.1.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7496509 Other None
SRR7496517 Other None
ERR323057 Sensitive lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR323043 HR-TB None
ERR323045 HR-TB None
SRR9971112 Other lineage2.2.1 None
ERR027293 Other None
ERR017781 Other lineage3 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR067681 HR-TB None
ERR1023302 MDR-TB lineage3;La3 None
ERR3283024 Other None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR133986 HR-TB None
ERR3283006 RR-TB lineage4.9 None
ERR1034652 Other None
ERR1035157 Other lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3283027 HR-TB None
ERR3283033 Sensitive lineage4.9 None
ERR3283036 HR-TB None
ERR3283032 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283051 Other lineage4.9 None
ERR3445503 HR-TB None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3445504 HR-TB None
ERR3468488 RR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797014 Other None
ERR3797024 Other lineage4.9 None
ERR3797017 Other None
ERR3797061 Other None
ERR3797044 Other None
ERR3797058 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR3797069 Other None
ERR3804155 Other lineage4.1.2.1 None
ERR4769497 HR-TB La1.2 None
ERR403298 HR-TB lineage4 None
ERR4769457 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR4407463 HR-TB None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798406 HR-TB None
ERR4797201 Other lineage1.2.2.2 None
ERR4800341 Other lineage3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811493 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR6359045 HR-TB None
ERR5336148 Other None
ERR5917985 MDR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR6359070 Other lineage4.9 None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736837 Other lineage4.9 None
ERR736875 HR-TB lineage4 None
ERR736839 Other None
ERR736867 HR-TB None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR7801175 RR-TB lineage4.6.5 None
ERR736874 HR-TB None
ERR752229 Other lineage4.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7821123 Other lineage1.1.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117709 HR-TB None
ERR9786440 Other lineage4.1 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786508 Sensitive lineage4.3.4.1;lineage4.3.3 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786639 Sensitive lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787165 Other lineage6 None
ERR9787197 Other None
ERR987707 MDR-TB lineage4.7 None
ERR9787336 Other lineage6 None
SRR1169194 Other None
ERR9896144 Other lineage3 None
ERR990545 Other lineage3 None
SRR10315567 Other lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR10993951 RR-TB La1.6 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1172728 MDR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173118 Other None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1173166 Other lineage4.9 None
SRR1173153 HR-TB None
SRR1173384 Other lineage4 None
SRR1173310 MDR-TB None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173778 Other None
SRR1173421 RR-TB lineage4.9 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175474 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1175491 MDR-TB lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180446 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184380 HR-TB None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196566 HR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR13837584 Sensitive lineage4.9 None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837707 Other lineage4.9 None
SRR13837702 Sensitive lineage4.9 None
SRR13861170 RR-TB lineage4.9 None
SRR13861138 RR-TB lineage4.9 None
SRR13861140 MDR-TB lineage4.9 None
SRR13861149 RR-TB lineage4.9 None
SRR13861151 RR-TB lineage4.9 None
SRR13861169 RR-TB lineage4.9 None
SRR13861178 RR-TB lineage4.9 None
SRR13861182 RR-TB lineage4.9 None
SRR13861196 RR-TB lineage4.9 None
SRR13861199 RR-TB lineage4.9 None
SRR13861197 RR-TB lineage4.9 None
SRR13861218 RR-TB lineage4.9 None
SRR13861202 RR-TB lineage4.9 None
SRR13861216 RR-TB lineage4.9 None
SRR13861236 RR-TB lineage4.9 None
SRR13861222 RR-TB lineage4.9 None
SRR13861232 RR-TB lineage4.9 None
SRR13861233 RR-TB lineage4.9 None
SRR13861276 RR-TB lineage4.9 None
SRR13861245 RR-TB lineage4.9 None
SRR13861262 RR-TB lineage4.9 None
SRR13861274 RR-TB lineage4.9 None
SRR13861277 RR-TB lineage4.9 None
SRR13861282 RR-TB lineage4.9 None
SRR13861299 RR-TB lineage4.9 None
SRR13861284 RR-TB lineage4.9 None
SRR13861283 Other lineage4.9 None
SRR13861292 RR-TB lineage4.9 None
SRR13861320 RR-TB lineage4.9 None
SRR13861310 RR-TB lineage4.9 None
SRR13861316 RR-TB lineage4.9 None
SRR13861321 RR-TB lineage4.9 None
SRR13861337 RR-TB lineage4.9 None
SRR13861355 RR-TB lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR13861357 RR-TB lineage4.9 None
SRR13861346 RR-TB lineage4.9 None
SRR13861378 RR-TB lineage4.9 None
SRR13861366 RR-TB lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861402 Other lineage4.9 None
SRR13861406 MDR-TB lineage4.9 None
SRR13861410 MDR-TB lineage4.9 None
SRR13861408 MDR-TB lineage4.9 None
SRR13861437 RR-TB lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861446 RR-TB lineage4.9 None
SRR13861443 RR-TB lineage4.9 None
SRR13861440 RR-TB lineage4.9 None
SRR13861454 RR-TB lineage4.9 None
SRR13861451 RR-TB lineage4.9 None
SRR13861450 RR-TB lineage4.9 None
SRR13861458 MDR-TB lineage4.9 None
SRR13861481 RR-TB lineage4.9 None
SRR13861465 RR-TB lineage4.9 None
SRR13861475 RR-TB lineage4.9 None
SRR13861488 RR-TB lineage4.9 None
SRR13861484 RR-TB lineage4.9 None
SRR13861498 RR-TB lineage4.9 None
SRR13861491 RR-TB lineage4.9 None
SRR13861495 MDR-TB lineage4.9 None
SRR13861501 RR-TB lineage4.9 None
SRR13861508 RR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861513 RR-TB lineage4.9 None
SRR13861506 RR-TB lineage4.9 None
SRR13861524 RR-TB lineage4.9 None
SRR13861517 RR-TB lineage4.9 None
SRR13861520 RR-TB lineage4.9 None
SRR13861530 RR-TB lineage4.9 None
SRR13861547 RR-TB lineage4.9 None
SRR13861542 RR-TB lineage4.9 None
SRR13861543 RR-TB lineage4.9 None
SRR13861560 RR-TB lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861563 RR-TB lineage4.9 None
SRR13861561 RR-TB lineage4.9 None
SRR13861603 RR-TB lineage4.9 None
SRR13861565 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861589 RR-TB lineage4.9 None
SRR13861588 RR-TB lineage4.9 None
SRR13861599 RR-TB lineage4.9 None
SRR13861618 RR-TB lineage4.9 None
SRR13861590 RR-TB lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR13861631 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861662 RR-TB lineage4.9 None
SRR13861632 MDR-TB lineage4.9 None
SRR13861678 RR-TB lineage4.9 None
SRR13861701 RR-TB lineage4.9 None
SRR13861695 RR-TB lineage4.9 None
SRR13861703 RR-TB lineage4.9 None
SRR13861729 RR-TB lineage4.9 None
SRR13861724 RR-TB lineage4.9 None
SRR13861713 RR-TB lineage4.9 None
SRR13861722 RR-TB lineage4.9 None
SRR13861736 RR-TB lineage4.9 None
SRR13861735 MDR-TB lineage4.9 None
SRR13861737 RR-TB lineage4.9 None