EBG00000313339 - n.150T>C
Drug resistance types
48 Sensitive
9 RR-TB
80 HR-TB
12 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| 55 | |
| lineage4.9 | 22 |
| lineage2.1 | 3 |
| lineage4.5 | 1 |
| lineage4 | 57 |
| lineage4.1 | 1 |
| lineage4.3.3 | 3 |
| lineage1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 18 |
| lineage4.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2 | 5 |
| La1.8.1 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.4.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675555 | HR-TB | None | ERR4816084 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5341456 | Other | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR5535933 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323107 | Other | lineage4 | None | SRR8217918 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1034634 | HR-TB | None | ERR323045 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736848 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786774 | Sensitive | lineage4.3.4.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9119669 | HR-TB | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675270 | HR-TB | None | ERR181744 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4814623 | Other | lineage4.8 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None |
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