Rv3596c - c.348T>C


Drug resistance types
62 Sensitive 8 RR-TB 62 HR-TB 21 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 83 Other
lineage Counts
lineage Count
lineage4.9 107
La1;lineage4.9 3
lineage2.2.1 12
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.9 12
lineage4.9;lineage6.3 2
lineage1;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 9
lineage4.5 1
lineage4.1.2.1 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 4
lineage4.3.4 1
La3;lineage2.1;lineage4.9 1
La3;lineage4 1
La2;lineage2.2 1
lineage4.6.3;lineage4.9 3
lineage2.1;lineage4.9 2
La2;lineage4.9 2
lineage4.6.2.2 2
lineage3.1.2.2 1
lineage4.4.2 1
lineage3 4
lineage1.1.3.1 1
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1.1 2
lineage4.2.1.1 1
lineage5.1.4 1
La1.7;M.canetti;lineage4.9 2
lineage4.1;lineage4.8 1
lineage2.2.1;lineage4.9 1
lineage4.3.4.2.1 1
lineage4.2.1 1
La1.8.1 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.1 2
lineage4.3.3 2
5
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.9;lineage7 3
lineage4.8 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4 1
lineage4.6.1.1 1
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.3.2;lineage4.9 1
lineage4.1.2 1
lineage2.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage4.4.1.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 1
La2;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 239
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3797087 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1175474 Other lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675477 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675455 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR990545 Other lineage3 None
ERR4819877 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675247 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1196478 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1140724 Other lineage2.2.1 None
ERR2693252 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR7236177 Other La1.8.1 None
ERR323062 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR9787014 Other lineage6.1.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR387051 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR4820773 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675235 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063849 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR176751 Other lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1184329 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR6044835 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
ERR176778 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR400345 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6046564 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
ERR987722 MDR-TB None
ERR4769442 Sensitive lineage4.9 None