Rv0668 - c.3204T>G
Drug resistance types
45 Sensitive
1 RR-TB
18 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 48 |
| lineage3 | 3 |
| lineage2.2.1 | 6 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4 | 3 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 3 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.9.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| 1 | |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4815364 | Sensitive | lineage4.1.2.1 | gb | SRR5535933 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR11662694 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR2514552 | Sensitive | lineage3 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR373947 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None |
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