Rv1630 - c.345C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
114 Sensitive
4 RR-TB
32 HR-TB
16 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 139 |
| lineage4 | 10 |
| 12 | |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 8 |
| lineage2.2.1 | 24 |
| lineage3.1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 4 |
| La1.3 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage3 | 5 |
| lineage4.5 | 2 |
| lineage1.2.1 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.1.2.1 | 8 |
| lineage4.7 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 4 |
| La1.8.1 | 2 |
| lineage4.3 | 1 |
| lineage6 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 9 |
| lineage2.2.1.2 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.1;lineage4.1.2.1 | 1 |
| lineage4.2.1 | 3 |
| La1.7.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage5.1.2 | 1 |
| lineage1.1;lineage4.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.3 | 2 |
| M.canetti;lineage1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.3 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 299 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341296 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR7496517 | Other | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR11081257 | Other | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4816999 | Other | None | ERR4596902 | MDR-TB | lineage3 | None | SRR6789626 | Other | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR7902759 | Sensitive | lineage1.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819932 | Sensitive | lineage4.7 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR10809087 | Sensitive | lineage4.4.1.1 | None | ERR11081258 | Other | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675549 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR3675221 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046305 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6045347 | Other | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4814683 | Sensitive | lineage1.1;lineage4.1.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR2514552 | Sensitive | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR363502 | Other | lineage4.9 | None | ERR9117709 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1180446 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR7496509 | Other | None | SRR7240033 | Other | La1.8.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR3675572 | Other | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR11466061 | Sensitive | lineage4.9.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675448 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR29126968 | Sensitive | lineage4.7 | None | SRR6046593 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1;lineage4.1.3 | None | ERR4178226 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675236 | Other | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR4817998 | Other | lineage3 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR11068570 | Other | lineage4 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4817060 | Other | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675270 | Other | lineage4.9 | None | ERR4815604 | Other | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR3797069 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None |
|---|
