SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR4814683
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR6785527
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR1023236
|
Other
|
lineage6.1.3
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR11465333
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR29126968
|
Sensitive
|
lineage4.7
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
SRR6046305
|
Sensitive
|
lineage4.9
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
SRR6785262
|
Sensitive
|
lineage4.2.1
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR4820043
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
ERR7902759
|
Sensitive
|
lineage1.2.1
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR9971065
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR9786639
|
Sensitive
|
lineage4.8
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR2514390
|
Sensitive
|
lineage3.1.2.1;lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR4818811
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11466061
|
Sensitive
|
lineage4.9.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR3675448
|
Other
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR16156775
|
Other
|
lineage4.9
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR4814396
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
ERR4818583
|
Other
|
lineage4.3.3
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR10809087
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR6785413
|
Other
|
lineage2.2.1
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR11465604
|
HR-TB
|
lineage4.8.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR216965
|
Sensitive
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|