EBG00000313339 - n.2446C>A
Drug resistance types
62 Sensitive
8 RR-TB
37 HR-TB
10 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 6 |
| lineage4.9 | 64 |
| lineage4 | 12 |
| 18 | |
| lineage2.2.1 | 15 |
| lineage3.1.3 | 2 |
| lineage3.1 | 1 |
| lineage3 | 13 |
| lineage4.5 | 2 |
| lineage1.1.2 | 4 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.8 | 6 |
| lineage4.2.1 | 3 |
| lineage4.1 | 1 |
| lineage1.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.1.3 | 1 |
| La1.8.1 | 6 |
| lineage3.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4.4.2 | 1 |
| La1.3 | 8 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage2.2 | 4 |
| lineage4.2.2.2 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 2 |
| lineage1.2.1.2 | 1 |
| La1.4 | 1 |
| lineage2.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 205 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4816964 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815906 | Other | lineage2.2.1 | gb | ERR2027220 | Other | lineage3.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817434 | Other | lineage3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR228175 | Sensitive | lineage3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4 | None | SRR4034762 | Sensitive | lineage4.1.2 | za | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR228180 | Sensitive | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2512599 | Other | lineage3 | gb | ERR4818561 | HR-TB | lineage4 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR2514857 | Other | lineage2.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819933 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341221 | Sensitive | lineage1.1.2 | None | SRR5341456 | Other | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR6359082 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341330 | HR-TB | None | ERR4820130 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR5431730 | Other | La1.8.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045466 | Sensitive | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR5535912 | MDR-TB | lineage3.1.1 | None | ERR2660484 | Sensitive | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821937 | Sensitive | lineage4.9 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045053 | Other | None | SRR6046141 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR4831117 | HR-TB | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982552 | HR-TB | lineage1.2.2 | None | ERR3275190 | Other | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7131076 | Sensitive | lineage5.1.2 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799908 | Pre-XDR-TB | lineage3 | in | ERR6359070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR736837 | Other | lineage4.9 | None | ERR7801128 | Sensitive | lineage4.2.2.2 | None | ERR9787336 | Other | lineage6 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1172717 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR12199485 | Other | lineage2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR14782405 | HR-TB | None | SRR16278274 | Other | La1.4 | None | SRR17163490 | MDR-TB | lineage3.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1791725 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR23174455 | Other | La1.8.1 | None |
|---|
