EBG00000313339 - n.2446C>A
Drug resistance types
63 Sensitive
6 RR-TB
27 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 1 |
| lineage4.9 | 88 |
| lineage2.2.1 | 14 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 4 |
| La1.3 | 5 |
| lineage3.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.8 | 9 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage4.2.1 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2 | 3 |
| La1;lineage4.9 | 2 |
| lineage3 | 5 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 7 |
| lineage4 | 3 |
| lineage6.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La1.4 | 1 |
| lineage2;lineage4 | 1 |
| lineage1.1.1 | 3 |
| lineage2.2.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4769427 | Other | La1.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR10796598 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | SRR1181256 | Other | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7236399 | Other | La1.8.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | DRR188519 | Other | lineage4.4.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4769552 | Sensitive | La1.3 | None | ERR3468488 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR7240538 | Other | La1.7.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR6046253 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1181368 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1791725 | Other | La1.8.1 | None | SRR5431730 | Other | La1.8.1 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR7240476 | Other | La1.8.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR867569 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR7236330 | Other | La1.8.1 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None |
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