Rv0668 - c.1443C>G
Drug resistance types
52 Sensitive
38 RR-TB
126 HR-TB
27 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| 75 | |
| lineage4.9 | 94 |
| lineage2.2.1 | 24 |
| lineage4 | 28 |
| lineage4.3.3 | 3 |
| lineage2.2 | 5 |
| lineage3 | 11 |
| lineage4.1.2.1 | 14 |
| lineage4.3.4 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.2 | 1 |
| lineage6 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.2 | 2 |
| lineage2 | 2 |
| lineage4.8 | 7 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| La1.8.1 | 7 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.2.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4 | 1 |
| La1.7.1 | 1 |
| lineage4.4.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4;lineage2 | 1 |
| lineage1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 329 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769521 | HR-TB | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5979407 | Other | lineage3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9634265 | Sensitive | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119669 | HR-TB | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787336 | Other | lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11462861 | Other | La1.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173310 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1640750 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1791696 | Other | La1.8.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR3675486 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675222 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR181744 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR212034 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212123 | Other | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817310 | Other | lineage4.9 | None | ERR4818126 | RR-TB | lineage1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818561 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4821057 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR4830353 | Other | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR5311081 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896229 | Other | lineage4.9 | None | ERR294248 | HR-TB | None | SRR6896545 | Other | lineage4.9 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1063857 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283021 | HR-TB | None | ERR3283022 | Sensitive | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR3797081 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None |
|---|
