Rv3245c - c.-526T>C


Drug resistance types
41 Sensitive 31 RR-TB 58 HR-TB 75 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 81 Other
lineage Counts
lineage Count
La1.2;La1.8.1 1
lineage4.9 111
M.canetti;lineage2.1;lineage4.9 23
La1.7;lineage4.9 11
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage4.1.1.3 1
lineage2.2.1 11
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2 4
La3;lineage4.9 10
La1.7;M.canetti;lineage4.9 5
lineage4.5 3
M.canetti;lineage4.9 6
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4 6
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.9;lineage7 2
M.canetti;lineage2.1 1
lineage4.3.3 3
La1.7.1 2
2
lineage3.1;lineage9 1
lineage4.1.1.1 1
lineage1.1.2;lineage4 1
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4 1
lineage4.1.2.1 5
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3 5
La1.8.1 2
La1.7;lineage4.9;lineage7 1
lineage4.2.1 1
lineage4.8 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1 1
lineage2.2.1.2 2
lineage2.1;lineage4.3.2 1
lineage4.9;lineage9 1
lineage2.2.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.2 1
lineage4.1.1.3;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage2.2.1;lineage4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.2.1.1 1
lineage6.1.3 1
lineage4.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage4 1
La1.2.BCG 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.2 1
spoligotype Counts
spoligotype Count
None 290
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045371 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675260 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR12708416 Sensitive None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866807 RR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675507 RR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR1167055 Other lineage4.1.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675270 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6046245 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1791696 RR-TB La1.8.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799025 Other lineage4.8 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046897 Sensitive lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063846 HR-TB lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675387 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR1180399 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4769452 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR926155 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045503 Other lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR971389 Other lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR21733183 RR-TB lineage1.1.2 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4818929 HR-TB lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
SRR3675501 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR13861153 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR473332 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None
SRR1640750 RR-TB None
ERR6359074 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR3283030 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR26399490 Sensitive lineage4.9 None