Rv3245c - c.-526T>C


Drug resistance types
61 Sensitive 17 RR-TB 88 HR-TB 38 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 85 Other
lineage Counts
lineage Count
lineage4.9 113
lineage2.1;lineage4.9 6
lineage1.1.2 1
La1.2;La1.8.1 1
lineage2.2.1 12
La3;lineage4.9 10
M.canetti;lineage2.1;lineage4.9 23
lineage4 6
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage3 5
La1.8.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage2.2.1.2 2
lineage6.1.3 1
La1.7;lineage4.9 11
La1.7;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage4.1.2.1 5
lineage1.1.1;lineage4 1
La1.2.BCG 1
M.canetti;lineage4.9 6
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 5
lineage3.1;lineage9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 3
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.3 3
La3;M.canetti;lineage4.9 1
lineage2.2 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1.2;lineage4 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 1
lineage4.5 3
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1 1
lineage1.1.1 1
lineage4.9;lineage7 2
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
La3;lineage4 1
La2;lineage2.2 1
lineage2.1;lineage4.3.2 1
lineage4.6.3;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage2.2 1
lineage4.9;lineage9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.2.2.1;lineage4.4.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.1.3;lineage4.9 1
La1.7.1 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2.1 1
lineage4.1.1.1 1
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4 1
La2;lineage4.9 1
lineage4.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 293
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045347 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR400326 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR1791696 Other La1.8.1 None
ERR400336 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR1023236 Other lineage6.1.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808730 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6044815 Other lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2514327 HR-TB lineage4.8 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1175496 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9119669 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046133 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4819877 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR926164 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR14066533 Sensitive lineage1.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3468607 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675507 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR3797080 Sensitive lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR161037 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4816656 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR29050859 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR5311094 HR-TB lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR26399265 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
SRR6045217 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4819241 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4811030 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675580 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None