Rv3596c - c.669C>G


Drug resistance types
15 Sensitive 8 RR-TB 125 HR-TB 26 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 117 Other
lineage Counts
lineage Count
lineage4.8;La3 1
lineage4;lineage1.1.2 1
lineage4.3.3 4
lineage4.6.1.2 5
lineage2.2.2 2
lineage4 18
lineage4.8 7
lineage2.2.1 21
lineage4.1.2.1 23
La1.8.1 3
119
lineage4.1.2 1
lineage4.9 34
lineage4.2.2.2 1
lineage3 7
lineage1.2.2.2 2
lineage4;lineage1.1 1
lineage4.7 2
lineage4.9;lineage4.2.1 1
lineage5 2
lineage3.1 4
lineage1.1 1
lineage4.3.4 1
lineage4.1.3 2
lineage3.1.1 1
lineage2 3
lineage1.1.2 2
lineage4.6.1.1 1
lineage2.2 4
lineage4.3.2.1 1
lineage4.3.2 2
lineage4.6.2.2 1
lineage6 1
lineage6.3.1 1
lineage2.2.1.2 2
lineage4.4.1.1 2
lineage1.2.1.2.1 1
lineage2.1 2
lineage4.5 2
lineage3.1.3 1
lineage4.1 1
lineage4.1.1 1
lineage4.4.2 1
lineage3;lineage2.1 1
lineage4.3.4.2.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 296
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817893 Other lineage4.8;La3 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818655 Other lineage4.3.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4815815 Sensitive lineage4 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR2432997 Other lineage4.8 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2513229 MDR-TB lineage2.2.1 None
ERR2509673 Other lineage2.2.1 None
ERR4818347 Other lineage4.1.2 None
ERR4818394 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR4818393 RR-TB lineage3 None
ERR4818561 HR-TB lineage4 None
SRR5007188 Other lineage4 None
ERR4818615 Other None
ERR4819280 Sensitive lineage4 None
SRR5341373 HR-TB lineage4 None
ERR4819217 Other lineage1.2.2.2 None
SRR5341418 Other None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341400 HR-TB lineage4 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341432 HR-TB lineage4 None
ERR4819546 HR-TB lineage3 None
ERR2514327 HR-TB lineage4.8 None
SRR5341293 HR-TB lineage4 None
SRR5341313 HR-TB None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
SRR5341315 Sensitive None
ERR4819932 Other lineage4.7 None
SRR5535933 HR-TB None
ERR2693239 HR-TB None
SRR5341333 HR-TB None
ERR4821053 Other lineage3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4821310 Other lineage5 None
ERR4821550 Other lineage2.2.1 None
ERR4821578 Other lineage4.1.2.1 None
SRR6045359 Sensitive lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045217 Other lineage4 None
SRR6044790 HR-TB None
ERR278594 HR-TB None
SRR6325442 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046362 HR-TB None
ERR2446563 Other lineage2.2.1 nl
SRR6046460 HR-TB None
SRR6325444 HR-TB None
ERR3275196 Other lineage2.2.1 nl
SRR6046514 HR-TB None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
SRR6046824 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR5311081 HR-TB None
SRR6785413 Other lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
SRR6789626 Other None
SRR6832787 RR-TB lineage2.2.1 None
ERR294248 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR5311099 HR-TB None
ERR323036 HR-TB None
ERR3077978 Other lineage1.1 None
ERR502532 HR-TB None
ERR502889 Other None
ERR5311090 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7585435 Other lineage4.9 None
SRR7496509 Other None
SRR7496523 Other lineage4.7 None
SRR7496517 Other None
SRR7535086 Other None
ERR323038 HR-TB None
ERR323063 HR-TB None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323068 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR067712 HR-TB lineage4 None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR1035157 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3439432 Other None
ERR3283013 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR133986 HR-TB None
ERR3283008 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR3797058 Other lineage4.9 None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR403298 HR-TB lineage4 None
ERR4407463 HR-TB None
ERR4188350 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR4769457 Other lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR4796929 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4798406 HR-TB None
ERR4797588 MDR-TB lineage3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4799025 Pre-XDR-TB None
ERR4811142 MDR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR5336148 Other None
ERR6359045 HR-TB None
ERR6358837 HR-TB None
ERR702406 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR9787197 Other None
SRR069981 HR-TB lineage2.2.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR9787139 Other lineage6.3.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR10809074 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1169194 Other None
SRR1172857 MDR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172817 HR-TB None
SRR1173153 HR-TB None
SRR1172951 Other None
SRR1172885 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173281 RR-TB lineage3 None
SRR1173384 Other lineage4 None
SRR1173385 Sensitive lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173400 Other None
SRR1173629 Other None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173740 Other None
SRR1175049 RR-TB None
SRR1173788 Other None
SRR1180446 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180440 Other lineage4.9 None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184308 Sensitive lineage4.9 None
SRR1184388 Other None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR13861386 HR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13837643 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR13861153 Other lineage4.9 None
SRR13861447 RR-TB lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR1640750 HR-TB None
SRR15368973 Other None
SRR14782405 HR-TB None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1710057 Other lineage2.1 None
SRR1791696 Other La1.8.1 None
SRR1791910 Other None
SRR18213713 HR-TB lineage4.5 None
SRR18003019 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR3416776 Other lineage2.1 None
ERR4815301 Other lineage4.4.2 None
ERR4814352 HR-TB lineage2.2.1 None
ERR158583 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675236 HR-TB None
ERR4814748 Other lineage4.8 None
SRR3675486 HR-TB None
SRR3675221 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675311 Other None
SRR3675383 HR-TB None
ERR4816967 RR-TB lineage5 None
SRR3675502 Other None
ERR4815752 Other lineage4.9 None
ERR4817037 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
SRR3675545 HR-TB None
ERR2027263 Other lineage4 None
ERR4816548 MDR-TB lineage4.5 None
SRR3675550 Other None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
SRR3675572 Other None
ERR4816585 Other lineage2.2 None
SRR3742665 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR502912 Other lineage2.2.1 None