Rv0682 - c.339A>C
Drug resistance types
76 Sensitive
3 RR-TB
46 HR-TB
9 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 132 |
| lineage4.9;lineage6.1.3 | 1 |
| 2 | |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.2.1 | 15 |
| lineage2.2.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.8.1 | 3 |
| lineage1.1.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4 | 3 |
| La1;lineage4.9 | 3 |
| La1;lineage4.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1.2.1 | 2 |
| La1.2.BCG | 1 |
| lineage2.2 | 3 |
| lineage3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage6.1.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.3 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 207 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR137286 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR29096935 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR3797073 | Other | La1.8.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR5341387 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR29096873 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None |
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