Rv0682 - c.339A>C


Drug resistance types
25 Sensitive 4 RR-TB 81 HR-TB 9 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 77 Other
lineage Counts
lineage Count
La1.8.1 3
lineage2.2 3
lineage4.9 129
lineage1.2.1.1 1
lineage2.2.1 14
lineage6.1.3 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;lineage4.9 1
La1;lineage4.9 3
lineage4.1.2.1 2
La1.7;lineage4.9 3
lineage1.1.2 2
lineage4.3.1;lineage4.9;lineage6 1
lineage2.2.1.2 2
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage4.9;lineage9 1
lineage4.8;lineage4.9 2
M.canetti;lineage4.9;lineage9 1
2
lineage4 3
La1.6;lineage4 1
lineage4.1.1.2 1
lineage4.4.1.1.1 1
lineage4.1.2 1
lineage4.3.3 2
La1;lineage2;lineage4.9 1
lineage4.3.4.2.1 2
M.canetti;lineage1 1
lineage4.3.2.1 1
lineage2.2.1.2;lineage7 1
lineage4.2.1 1
lineage4.6.2.2 1
lineage2;lineage4 1
lineage3;lineage4.9 1
La1.2.BCG 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 2
lineage3 1
lineage1.1.3.1 1
lineage3.1.3 1
La1.2 1
spoligotype Counts
spoligotype Count
None 203
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
SRR7535082 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR20969731 Other lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1184308 RR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR6044875 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR10808730 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28351488 MDR-TB lineage2.2.1 None
ERR4796577 HR-TB None
SRR28351584 HR-TB lineage2.2.1 None
SRR28351339 MDR-TB lineage4 None
SRR28351554 Other La1.6;lineage4 None
ERR137286 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4797264 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4819357 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4798099 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR6866639 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR3797019 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR108471 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
SRR10809074 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR4769450 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR5341396 Other lineage3;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
ERR1063896 HR-TB None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6046046 Other lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4799025 Other lineage4.8 None
ERR323115 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4769442 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786444 Sensitive lineage4.8 None
ERR6358979 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4769427 Other La1.2 None
ERR6359070 Sensitive lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR4816964 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None