Rv0682 - c.339A>C
Drug resistance types
61 Sensitive
4 RR-TB
53 HR-TB
12 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage4.9 | 44 |
| La1.8.1 | 5 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 5 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 53 |
| lineage3.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| 41 | |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 2 |
| La1.2 | 2 |
| lineage2.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969731 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4816964 | Other | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | ERR212034 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR5341453 | Sensitive | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5535933 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6046250 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046385 | Other | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496471 | Sensitive | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323066 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3283040 | HR-TB | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811493 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None |
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