Rv0006 - c.135C>T
Drug resistance types
11 Sensitive
1 RR-TB
24 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1 | 1 |
| lineage4.9 | 34 |
| La3 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| 3 | |
| lineage4.9;lineage7 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9 | 3 |
| lineage1.2.1.1 | 1 |
| lineage3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR4816656 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4798495 | Sensitive | lineage1.1.2 | in | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675270 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR29097004 | Other | lineage3 | None | SRR6045347 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR28858610 | Sensitive | lineage1.1.2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR473332 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR234659 | Other | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6045053 | Other | lineage4 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR5818450 | Sensitive | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR176751 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
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