EBG00000313339 - n.182G>T
Drug resistance types
21 Sensitive
21 RR-TB
94 HR-TB
15 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 5 |
| 70 | |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage3;lineage2.1 | 1 |
| lineage4.8 | 9 |
| lineage1.1.3.2 | 2 |
| lineage4.3 | 1 |
| lineage3 | 9 |
| lineage4.9 | 36 |
| lineage4.3.3 | 5 |
| lineage4 | 8 |
| lineage4.1.2 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage1 | 2 |
| lineage2.2.1 | 21 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2.1 | 23 |
| lineage4.9.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.6 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 6 |
| lineage4.3.1.1 | 1 |
| lineage1.1 | 1 |
| lineage2.2 | 8 |
| lineage4.6.4 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3.1 | 2 |
| lineage4.4.2 | 1 |
| La1.8.1 | 4 |
| La1.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
| La3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21710931 | Sensitive | lineage4.1.1 | None | ERR161033 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR161149 | Other | lineage4.3.4.2.1 | mw | ERR4814573 | Other | lineage1.1.3.2 | None | ERR176751 | HR-TB | None | ERR163965 | Sensitive | lineage4.3.4.2.1 | mw | SRR3675222 | Other | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675501 | HR-TB | None | ERR176643 | HR-TB | None | ERR3275220 | Other | lineage3 | nl | SRR3675509 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229273 | Sensitive | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818988 | Other | lineage1 | None | ERR2510713 | Pre-XDR-TB | lineage2.2.1 | it | ERR2229143 | Other | lineage4.1.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2446144 | Other | lineage3 | nl | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR245758 | Other | lineage4.9.1 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR2510304 | Pre-XDR-TB | lineage3.1.2 | pk | SRR5007186 | Other | lineage4.6 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | ERR4821796 | Other | lineage4.1.1 | None | SRR6046087 | Other | None | SRR5526904 | MDR-TB | lineage2.2.1.1 | None | ERR2517528 | Other | lineage3 | nl | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6045555 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821975 | Sensitive | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6046133 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2446563 | Other | lineage2.2.1 | nl | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046659 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4831117 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323041 | HR-TB | None | SRR7829592 | Pre-XDR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR019855 | Other | lineage3 | None | ERR028362 | Sensitive | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439369 | Other | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468600 | Other | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4769452 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799992 | Sensitive | lineage3 | in | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR5865915 | MDR-TB | lineage2.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR736839 | Other | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736816 | Other | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR7801220 | HR-TB | lineage4.3.4.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7801221 | HR-TB | lineage4.3.4.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9786391 | Sensitive | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR990545 | Other | lineage3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1187037 | Sensitive | lineage4.1.2 | ca | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972221 | HR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837666 | Sensitive | lineage4.9 | None | SRR13837615 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861176 | Sensitive | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861168 | RR-TB | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR16115862 | Other | lineage4.1.1 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18912549 | Other | lineage4.1.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1640750 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None |
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