EBG00000313339 - n.182G>T


Drug resistance types
8 Sensitive 43 RR-TB 27 HR-TB 89 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 66 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 20
lineage4.8 8
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1 18
lineage4.9 42
lineage2.2.1.2 3
lineage4.9;lineage7 1
La1.7 1
lineage4.2;lineage4.9 2
lineage2.2.1 15
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1 1
lineage2.2.1.1 5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La3;lineage2.1;lineage4.9 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4 1
lineage4.1.1.3 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.2.1;lineage3;lineage4 1
lineage4.9.1 1
lineage2.2 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.9 5
lineage4.4.1.1 3
lineage4.1;lineage4.8 2
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.7;lineage4.9 2
lineage4.3.3 3
lineage2.1;lineage4.9 4
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.9 2
M.canetti;lineage2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.2.1.2.1 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.2 3
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 1
lineage4.6.3;lineage4.9 1
3
lineage4.3.4.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.6.4 2
La1.7.1 2
La3;M.canetti;lineage4.9 2
lineage3 4
La1.8.1 2
lineage4.6.2.2 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage1.2.2.1;lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.1.2.1.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
lineage4.4.2 1
La1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La1.2 1
lineage2.2.2 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 238
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR4769452 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR867566 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR3675507 RR-TB lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046492 Other lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR212033 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR245758 Other lineage4.9.1 None
SRR5535933 Other lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
SRR13861176 Other lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR1169306 Other La3;lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR176643 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
ERR4821704 Other lineage4.3.3 None
ERR176751 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1173421 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
ERR7821163 Other lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR18289200 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR1640750 RR-TB None
ERR12745274 Sensitive lineage4.3.4.2 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR2514327 HR-TB lineage4.8 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR9786619 Sensitive lineage4.8 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9896144 Other lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1791696 RR-TB La1.8.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046133 HR-TB lineage4.9 None
ERR9786391 Other lineage4.1.2.1 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR14782405 HR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR11466339 RR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR017781 Other lineage3 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
ERR108125 RR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR212001 HR-TB None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR13861510 Other lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR23961549 Other La1.2 None
SRR5341330 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
ERR12015085 Other lineage4.8 None
SRR1167055 Other lineage4.1.2.1 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR3797083 RR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
ERR978757 RR-TB lineage4.8 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR990545 RR-TB lineage3 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR13861151 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2517528 RR-TB lineage3 nl
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4769457 Other lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR069989 HR-TB lineage2.2.2 None
ERR4799513 HR-TB lineage2.2 None
SRR1181289 RR-TB lineage2.2.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR8665994 RR-TB lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None