Rv3596c - c.1701C>G


Drug resistance types
77 Sensitive 7 RR-TB 121 HR-TB 23 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 144 Other
lineage Counts
lineage Count
lineage4.3.3 4
lineage4.9;lineage4.6.3 1
lineage4.9 89
lineage4.1.1.1 1
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage3;lineage2.2.1 1
lineage6.3;lineage2.2.1 1
105
lineage4.1.1 3
lineage4 41
lineage2.2.1 16
lineage2.1 3
lineage4.8;lineage4.1.2 1
lineage4.4.1 1
lineage4.1.2.1 14
lineage4.3.4.2.1 6
lineage4.8 12
lineage4.5 3
lineage4.4.1.1 3
lineage2.2 6
lineage4;lineage2 1
lineage4.8;La3 2
La1.8.1 4
lineage4.1;lineage1 1
lineage4.1 2
lineage3 9
lineage4.1.2 1
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage1.1.1 1
lineage4.9;lineage3.1.2.1 1
lineage4.7 2
lineage4.9;lineage2.1 1
lineage4.2.1 1
La2 1
lineage4.8.1 1
lineage4.3.4.2 2
lineage4.3.4.1 1
lineage4.4.2 1
La1 1
lineage6.1.1 2
lineage4.1.3 2
lineage4;lineage3.1 1
La1.2 1
lineage2 4
lineage3.1.2 1
lineage4.6.1.1 2
lineage1.1.3.2 1
lineage4.3.2 1
lineage1.1.2 2
lineage4.6.2.2 2
lineage6 3
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1.1 2
lineage2.2.1.2 2
lineage4.9;lineage2.2 1
lineage3.1 2
lineage1.2.1.2 1
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 381
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21732980 Other lineage4.3.3 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR26399490 Sensitive lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR26399239 Sensitive lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR4814639 HR-TB lineage4 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
ERR4815471 Other lineage4.9 None
SRR3675221 HR-TB None
ERR1750941 Sensitive lineage4.8;lineage4.1.2 None
ERR702405 Sensitive lineage2.1 None
ERR1750943 Sensitive lineage4 None
ERR1750938 Other lineage4.4.1 None
SRR3675236 HR-TB None
ERR1750907 RR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675270 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675280 HR-TB lineage4.9 None
SRR3675311 Other None
SRR3675284 HR-TB lineage4.9 None
SRR3675572 Other None
SRR3675456 HR-TB None
ERR4816964 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4816151 Other lineage4.8 None
ERR4817037 Other lineage4.9 None
ERR212034 HR-TB None
SRR3675555 HR-TB None
ERR176740 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR4817060 RR-TB None
ERR4816322 Other lineage4.9 None
ERR4816548 MDR-TB lineage4.5 None
ERR4817667 HR-TB lineage4.8 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2 None
ERR4816762 Other lineage4;lineage2 None
ERR4815815 Sensitive lineage4 None
ERR216965 HR-TB lineage4.9 None
SRR3742665 HR-TB None
ERR4816852 Other lineage4.9 None
ERR4817453 Sensitive lineage4 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817735 Other lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR4817893 Other lineage4.8;La3 None
ERR4818021 Other La1.8.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817915 RR-TB lineage4.9 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR2513259 Other lineage3 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818394 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR4818536 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR5007188 Other lineage4 None
ERR4818561 HR-TB lineage4 None
ERR4819051 Other lineage4 None
ERR4818615 Other None
ERR4818624 Other lineage4.3.4.2.1 None
ERR3275201 Sensitive lineage4.8 nl
ERR4819322 Other lineage4;lineage1.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819314 Other lineage1.1.1 None
SRR5341373 HR-TB lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341400 HR-TB lineage4 None
ERR4819462 Other lineage4 None
ERR4820854 Other lineage4.1.2.1 None
ERR2514277 Sensitive lineage4.1.2.1 None
SRR5341432 HR-TB lineage4 None
ERR4819546 HR-TB lineage3 None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
SRR5341293 HR-TB lineage4 None
SRR5341313 HR-TB None
ERR4819781 Other lineage2.2.1 None
ERR4819933 Other lineage4.9 None
SRR5341302 HR-TB None
SRR5535933 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5341315 Sensitive None
SRR5341333 HR-TB None
SRR5341456 Other None
ERR2446570 Sensitive lineage4.8 nl
SRR5341470 HR-TB None
SRR5341330 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2660539 Other lineage4.9 None
SRR6045519 HR-TB None
ERR2693227 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044780 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6045053 Other None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046066 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046397 Other None
ERR2851356 Sensitive lineage4.9 None
SRR6046878 HR-TB lineage4 None
SRR6046540 HR-TB None
ERR4828628 MDR-TB lineage4.5 None
SRR6046492 Other None
SRR6046521 Other lineage4.4.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR323037 HR-TB lineage4 None
ERR502510 Sensitive lineage4 None
ERR485006 HR-TB lineage4.9 None
SRR6785413 Other lineage2.2.1 None
ERR502524 HR-TB La2 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR4817628 Sensitive lineage4.8 gb
SRR6789626 Other None
SRR7131023 Other lineage4.1.2.1 None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
SRR7496509 Other None
SRR7496471 Sensitive None
SRR7496517 Other None
SRR7535082 Sensitive lineage4 None
SRR7496523 Other lineage4.7 None
ERR11466174 Other lineage4.8 None
SRR7535086 Other None
SRR9971080 RR-TB lineage2.2.1 None
SRR7585435 Other lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323053 HR-TB None
ERR323043 HR-TB None
ERR323039 HR-TB None
ERR11641184 Pre-XDR-TB lineage4.3.4.2 None
ERR1035157 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
DRR188519 Other lineage4.4.2 None
ERR323108 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR3283010 Other La1 None
ERR11049020 Other lineage4.8 None
ERR1063839 HR-TB lineage2.2 None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283013 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283036 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283040 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3797047 HR-TB lineage4 None
ERR3439441 Other La1.8.1 None
ERR3445504 HR-TB None
ERR3797015 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3799304 Other lineage6.1.1 None
ERR3797069 Other None
ERR3797080 HR-TB lineage4.9 None
ERR387051 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473303 Sensitive lineage4.9 None
ERR4188247 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4769457 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR473367 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797474 Other None
ERR4797588 MDR-TB lineage3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4800341 Other lineage3 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4811022 HR-TB None
ERR12015083 Other lineage4.8;La3 None
ERR4810741 HR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR6359070 Other lineage4.9 None
ERR6866807 HR-TB lineage4 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736831 HR-TB lineage4.9 None
ERR702406 HR-TB None
ERR736837 Other lineage4.9 None
ERR736865 HR-TB None
ERR736848 HR-TB None
ERR736874 HR-TB None
ERR736867 HR-TB None
ERR7910877 MDR-TB lineage4.1.1 None
ERR7821123 Other lineage1.1.3.2 None
ERR751326 Sensitive lineage4 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117709 HR-TB None
ERR9786440 Other lineage4.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786569 Other lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9787030 Sensitive lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9787336 Other lineage6 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9787197 Other None
SRR1173166 Other lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1169194 Other None
SRR1172146 Sensitive lineage4.9 None
SRR1172234 Other None
SRR1172310 HR-TB None
SRR1172728 MDR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1172951 Other None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11462861 Other La1.8.1 None
SRR1172214 HR-TB lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172807 Sensitive lineage4.9 None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173384 Other lineage4 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1180312 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181368 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184380 HR-TB None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12006550 Other lineage1.2.1.2 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR12142341 HR-TB None
SRR13837599 Sensitive lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR13837766 Sensitive lineage4.9 None
SRR15368973 Other None
SRR14782405 HR-TB None
SRR1710057 Other lineage2.1 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18913742 Sensitive lineage3.1.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR20970016 Other lineage2.2 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR20969708 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR20632814 Sensitive lineage4 None
SRR20969731 Other lineage2.2.1 None
SRR25827682 Other None
SRR21677886 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR11068570 Other lineage4 None
ERR11081258 Other lineage4.8 None
ERR11081864 Other lineage3 None