Rv0668 - c.366G>C
Drug resistance types
14 Sensitive
50 RR-TB
107 HR-TB
19 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
106 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage1.2.1.2.1 | 1 |
| 91 | |
| lineage4.3.3 | 8 |
| lineage2.2.1 | 27 |
| lineage4.4 | 1 |
| La1.8.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.8 | 10 |
| lineage3 | 18 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 7 |
| lineage1.2.2 | 1 |
| lineage4.1 | 6 |
| lineage3.1.2 | 1 |
| lineage4 | 12 |
| lineage4.3.4.2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1 | 19 |
| lineage5 | 2 |
| La1.8.2 | 1 |
| lineage3.1 | 4 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage6 | 2 |
| lineage1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.4.1.1 | 8 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.1.3 | 1 |
| lineage2.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1 | 4 |
| lineage4.5 | 3 |
| lineage1.1 | 1 |
| lineage4.3 | 1 |
| La1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 310 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861566 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR14782405 | HR-TB | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1640750 | HR-TB | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR158583 | HR-TB | None | ERR4814312 | Other | lineage4 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3675482 | HR-TB | None | SRR3675502 | Other | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4815777 | Other | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4815684 | Other | lineage5.1.4 | gb | SRR3675486 | HR-TB | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814656 | Other | None | SRR3675222 | Other | None | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675270 | HR-TB | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4816982 | Other | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675383 | HR-TB | None | ERR4816944 | RR-TB | lineage2.2 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816133 | Other | La1.8.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | SRR3675545 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR3675558 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR3675571 | HR-TB | None | ERR4817069 | RR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816756 | RR-TB | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2515055 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR1035162 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4820266 | RR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819533 | Other | lineage1.1.2 | None | SRR5341418 | Other | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR5341222 | Sensitive | lineage3.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR4820107 | RR-TB | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821310 | Other | lineage5 | None | ERR4821288 | Other | lineage4.7 | None | ERR278594 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR2693227 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821773 | Other | La1.6 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6325442 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046815 | Other | lineage3 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4831117 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294248 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR067681 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR133986 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3439432 | Other | None | ERR3283025 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9787030 | Sensitive | lineage6 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861224 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None |
|---|
